Ochotona princeps (American pika): 101532843
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Entry
101532843 CDS
T07609
Name
(RefSeq) LOW QUALITY PROTEIN: interferon alpha-6-like
KO
K05414
interferon alpha
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04060
Cytokine-cytokine receptor interaction
opi04151
PI3K-Akt signaling pathway
opi04217
Necroptosis
opi04620
Toll-like receptor signaling pathway
opi04621
NOD-like receptor signaling pathway
opi04622
RIG-I-like receptor signaling pathway
opi04623
Cytosolic DNA-sensing pathway
opi04630
JAK-STAT signaling pathway
opi04650
Natural killer cell mediated cytotoxicity
opi04936
Alcoholic liver disease
opi05152
Tuberculosis
opi05160
Hepatitis C
opi05161
Hepatitis B
opi05162
Measles
opi05163
Human cytomegalovirus infection
opi05164
Influenza A
opi05165
Human papillomavirus infection
opi05167
Kaposi sarcoma-associated herpesvirus infection
opi05168
Herpes simplex virus 1 infection
opi05169
Epstein-Barr virus infection
opi05170
Human immunodeficiency virus 1 infection
opi05171
Coronavirus disease
opi05200
Pathways in cancer
opi05320
Autoimmune thyroid disease
opi05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
101532843
04151 PI3K-Akt signaling pathway
101532843
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
101532843
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
101532843
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
101532843
04621 NOD-like receptor signaling pathway
101532843
04622 RIG-I-like receptor signaling pathway
101532843
04623 Cytosolic DNA-sensing pathway
101532843
04650 Natural killer cell mediated cytotoxicity
101532843
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101532843
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
101532843
05161 Hepatitis B
101532843
05160 Hepatitis C
101532843
05171 Coronavirus disease
101532843
05164 Influenza A
101532843
05162 Measles
101532843
05168 Herpes simplex virus 1 infection
101532843
05163 Human cytomegalovirus infection
101532843
05167 Kaposi sarcoma-associated herpesvirus infection
101532843
05169 Epstein-Barr virus infection
101532843
05165 Human papillomavirus infection
101532843
09171 Infectious disease: bacterial
05152 Tuberculosis
101532843
09163 Immune disease
05320 Autoimmune thyroid disease
101532843
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101532843
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
101532843
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
opi04052
]
101532843
Cytokines and neuropeptides [BR:
opi04052
]
Cytokines
Interferons
101532843
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Interferon
Motif
Other DBs
NCBI-GeneID:
101532843
NCBI-ProteinID:
XP_012781173
LinkDB
All DBs
Position
1A:43329090..43329771
Genome browser
AA seq
227 aa
AA seq
DB search
MEIRLSTIEAIRAKQGLQRPSRARLRVTASATAASARSPTASPLPFLLVLLVLSPRSTCS
LDSHLPHSHGLGHRRTMTLLGQMRRVSPFSCLKDRHDXETPLEEWDGPQAQKAQAIFLLH
ESIQQLFTLNSTQEASAAWARALLDTVCTALFEQLCALEACRTQAVSLEGTPLMPEDSLL
AVRRNFHGIVVPDREETQPCAWEVVREEAXRAMSLSSTLQERLQSQE
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggaaattagactgtccactattgaagccatcagagcaaagcaaggtcttcagagacct
tcgagggccaggctcagagtcacagcatcagccacagcagcttctgccagatcccccacg
gcctcgccccttcccttcctgctggtcctgctggtgctcagccccaggtccacctgctct
ctggacagtcacctgcctcacagtcacggccttggtcacaggaggaccatgacgctcctg
ggacaaatgaggagagtctcccctttctcctgcctgaaggacagacacgacnntgagacc
cctctggaggagtgggatggaccccaggcccagaaggcacaagccatcttcctgctccat
gagagcatccagcagctcttcaccctcaacagcacacaggaggcttctgctgcctgggcc
agggccctcctggacacagtctgcactgcactctttgagcagctgtgtgccctggaagcc
tgcaggacacaggcagtgagtctggaggggacacccctgatgcctgaggactccctgctg
gctgtgaggagaaactttcatggaatcgtggtgcctgacagagaggaaacacagccctgt
gcctgggaggttgtgagggaagaagcctagagagccatgtcgttatcaagcactttgcaa
gaaagattacagagccaggaatga
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