Ochotona princeps (American pika): 101532870
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Entry
101532870 CDS
T07609
Symbol
PAXBP1
Name
(RefSeq) PAX3- and PAX7-binding protein 1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opi03041
]
101532870 (PAXBP1)
Spliceosome [BR:
opi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101532870 (PAXBP1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
Motif
Other DBs
NCBI-GeneID:
101532870
NCBI-ProteinID:
XP_004588629
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Position
14:complement(112272238..112308650)
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AA seq
912 aa
AA seq
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MFRKARRVNVRKRNDSEEEERERDEEQDPPPLLLPPPGAGEDAPGPGGESLLGPGPPSAL
TPGAAAESGGAAGFPGAAEPGNGLKPRKRPRENKEVPRASLLSFQDEEEENEEVFKVKKS
SYSKKIVKLLKKEYKEDLEKSKIKTELNSAADNEQPLDKPGHVKDANQEDGVPLGEHGDD
EMDMESEKEEEKPKAAGAFSSALSSLNVLRPGEIPDAAFIHAARKKRQMARELGDLTPHE
NEPGKGRLVREDENDASDDEDDDEKRRIVFSVKEKSQRQKIAEEIGIEGSDDDALVTGEQ
DEELSRWEQEQIRKGINIPQVQASQPTEVNMYYQNSYQTMPYGSSYGIPYNYTTYGSSDA
KSQKTDNTVPFKTPSNEMTPVTIDLVKKQLKDRLDSMKELHKANRQQHERHLQSRVDSTR
AIERLEGSSGGIGERYKFLQEMRGYVQDLLECFSEKVPLINELESAIHQLYKQRASRLVQ
RRQDDIKDESSEFSSHSNKALMAPNLDSFGRDRALYQEHAKRRIAEREARRTRRRQAREQ
TGKMADHLEGLSSDDEETSTDITNFNLEKDRISKESSKIFEDVLESFSSIDCIKSQFEAW
RSKYYTSYKDAYIGLCLPKLFNPLIRLQLLTWTPLEAKCRDFENMLWFESLLFYGCEERE
QEKDDVDVALLPTIVEKVILPKLTVIAENMWDPFSTTQTSRMVGITLKLINGYPSVVNAE
NKNTQVFLKALLLRMRRTLDDDVFMPLYPKNVLENKNSGPYLFFQRQFWSSVKLLGNFLQ
WYGIFSNKTLQELSIDGLLNRYILMAFQNSEYGDDSIKKAQNVINCFPKQWFMNLKGERT
ISQLENFCRYLVHLADTIYRNSMGCSDVEKRNARENIKQIIKLLASVRALDHAMTVASDH
NVKEFKSLIEGK
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaaggcccggcgggtgaacgtgcgcaagcggaacgactcggaggaagaggaa
cgagagcgggatgaggagcaggacccgccgccgctgctgctgccgcccccgggcgccggc
gaagacgcgccgggccccgggggagagtcgctgctgggccccgggccgccttcggcgctc
accccgggcgccgcggccgagagcggaggggccgccggcttccccggcgccgcggagcct
ggcaacgggctgaagccgcgcaaaaggcctcgcgagaacaaagaggtgccccgggccagc
ctgctgagcttccaggacgaggaggaagaaaacgaagaggttttcaaagtgaagaaatcc
agctatagcaaaaaaatagtaaagttgctcaagaaagaatacaaagaggacctcgagaaa
tccaagattaagacggaactcaattcagccgctgacaatgaacagccactggacaaaccc
ggacacgttaaggatgcaaaccaagaagatggagttcccctcggcgagcacggtgacgat
gagatggacatggagagcgagaaggaggaggagaagcccaaggccgcgggggccttctcc
agcgcgctctcgtctctgaatgttctccggccaggagaaattccagatgcagcttttata
catgcagcaaggaaaaagcgccaaatggcccgagaactgggagacctcacgcctcatgaa
aatgagccggggaaaggccgcctggttagagaggatgagaatgatgccagcgatgatgaa
gatgatgatgagaaacggcgtatcgttttttctgtgaaggaaaaatcacaaaggcagaag
attgctgaggaaataggcattgaggggagtgatgacgacgctttggtaacaggcgagcaa
gatgaagagctcagcagatgggagcaggagcagataagaaaaggaattaatatcccgcag
gtccaagcaagtcagcccacggaagtgaatatgtactaccagaactcttaccagacaatg
ccttacggctcatcctatggcattccttacaattacacgacctatggatcgtcggatgcc
aaatctcaaaaaacagataatacagtccctttcaaaactcccagtaatgagatgactccc
gttactattgatttggtaaagaaacagcttaaagacaggttggactccatgaaagagctg
cacaaagcaaatcggcagcagcacgagagacacctgcagagccgagtggactccaccagg
gccattgagagattggaagggtcttctgggggtattggtgaacggtataaatttttgcaa
gaaatgcgagggtatgtccaagacttgcttgagtgtttcagtgaaaaggtgccactgatt
aatgaacttgaatcagcaattcatcagctgtacaaacagcgagcttcccgccttgtccaa
agacgacaagatgatattaaagatgaatcttcggagttttcaagccattcaaataaagct
ctgatggcaccaaatcttgattcctttggtcgtgatcgggcactgtaccaagaacatgca
aaacgtcggattgcagagcgagaggccaggaggactcgtcgtcggcaagcccgagagcaa
actgggaagatggctgatcaccttgaaggcctttcgagtgatgacgaagaaacgtccaca
gatattactaatttcaacctggaaaaagatcgaatatccaaagagtccagcaagattttt
gaagatgtccttgagagtttctcctccatcgactgtattaagtcgcagttcgaagcatgg
cgttcaaaatactacacttcctacaaagatgcttacattggcctttgcctgcccaagctg
ttcaacccgctcatacggctgcagctgctcacctggactcctctggaggcaaaatgtcgt
gactttgagaatatgctgtggtttgagtctttgttgttctatggttgtgaggaacgtgag
caagaaaaagacgatgtggatgttgcactgctacctaccattgtggagaaggtgatcctt
cctaagctgacagtgatagctgaaaatatgtgggaccctttttctacaacacagacttca
agaatggttggaattacactaaagttaataaatggatatccttcagtagtaaatgcagaa
aataaaaatacacaggtattcctaaaggcacttttattgcgaatgagaagaactttagat
gacgatgtgtttatgcctttgtatcccaaaaatgtcttagaaaataaaaattcggggcct
tacttgtttttccaacgacagttttggtcttcagttaagctattaggaaatttccttcag
tggtacggcattttctccaataaaactcttcaggagttatcaatagatggtctattgaat
agatacattcttatggcttttcagaattcagaatatggcgatgacagcatcaaaaaagcc
caaaatgtaattaactgcttccccaagcagtggttcatgaatctgaaaggagaaagaact
atttctcaattagaaaatttttgtcgataccttgtacacctagcagatacaatttataga
aacagtatggggtgctctgatgtggagaaaagaaatgcaagagaaaacataaaacagata
ataaaacttcttgcaagtgttcgagctttggatcatgctatgactgttgcaagtgaccac
aatgtgaaagaatttaaatctttgatcgaaggaaaatag
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