Ochotona princeps (American pika): 101532904
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Entry
101532904 CDS
T07609
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101532904 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101532904 (EXOSC5)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101532904 (EXOSC5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
101532904
NCBI-ProteinID:
XP_004598054
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All DBs
Position
5:6294309..6298502
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AA seq
235 aa
AA seq
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MEEAVLADLDGGAETGTESGSRDHGCSLRHFVCEQSLLSRPDGSASFQQGDTSVLAGVYG
PAEVKVSKEIFNKATLEVILRPKIGLPGVAEKSREQLIRSTCEAVVLGALHPRTSITVVL
QVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSDGTLVLDPTVKQEKEARAV
LTFALDSVERKLLMSTTKGLYSDVELQQCLAAAQAASQHVFRFYRDSLLQRYSKS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcggtacttgcggatttggacggcggcgccgagacgggaacggagtctggc
tcccgggaccacggctgcagcctccggcactttgtctgcgaacagagcttgctgtcccgg
ccagatggctctgcgtcgttccagcaaggtgatacctctgtcctggccggggtgtacggg
ccggccgaggtgaaggtcagtaaagagatcttcaacaaagccacgctcgaggtgatcctg
aggccgaagatcggactgcctggggtcgcggagaagagccgcgagcagctgatccggagc
acgtgcgaggcggtggtgctgggggcgctgcacccccgcacctccatcacggtggtgctg
caggtcgtcagtgatgctggctcccttctggcctgttgcctgaatgcggcctgcatggca
ttggtggacgcgggtgtgcccatgcgggctctcttctgcggggtcacctgtgccttggac
tcggatgggaccctcgtgctggaccccacagtcaagcaagagaaggaggcccgggcagtc
ctgaccttcgcacttgacagcgtggagcggaagctgctgatgtccaccaccaaggggctc
tactcagatgttgagcttcagcagtgcctggctgcggcccaggccgcctcgcaacacgtc
ttccgcttctaccgggactcgctgctgcagcgctactccaagagctga
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