Ochotona princeps (American pika): 101533057
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Entry
101533057 CDS
T07609
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04517
IgSF CAM signaling
opi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101533057 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101533057 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
opi04812
]
101533057 (SPTBN4)
Cytoskeleton proteins [BR:
opi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
101533057 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
101533057 (SPTBN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Rv3651-like_N
PH_11
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
101533057
NCBI-ProteinID:
XP_004598135
LinkDB
All DBs
Position
5:complement(7338284..7405644)
Genome browser
AA seq
2379 aa
AA seq
DB search
MAQVPGEVDNMEGLPASNNNNNPATRWDSPERGWEREPPAASTTAASLFECSRIKALADE
REAVQKKTFTKWVNSHLARVGCHIGDLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRIH
SLENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRE
TRSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFSKLTKSNAN
YNLQRAFRTAEQHLGLARLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIG
KVLDQVLEVGKIIERYEELAAELLAWIHRTVGLISNQKFANSLSGVQQQLQAFTAYCTLE
KPAKFQEKGNLEVLLFSIQSKLRACNRRLFVPREGCGIWDIDKAWGQLEKAEHEREAALR
AELIRQEKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADI
AAYEERVQGVAELAQALAAEGYYDARRVAAQRDSVLRQWTLLTGLVGARRTRLEQNLALQ
KVFQEMVYMVDWMEEMQAQLLSRECGQHLVEAEDLLQKHGLLEGDIAAQSERVEALNAAA
LRFSQLQGYQPCDPQVICNRVNHVHGCLAELQEQAAQRRGELEASRSLWALLQELEEAES
WARDKERLLEAASGGAGAAGPAGGAHDLSSTARLLAQHKILQGELGGRRVLLQQALRRGE
ELAAAGGTVGPGAEMVHLAGLAERAASARRRWQRLEEAAARRERRLQEARALHQFGADLD
GLLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGSVGGLRRQLATLGGAS
GAGPLVVALQVRVVEAEQLFAEVTEVAALRRQWLRDALAVYRMFGEVHACELWIGEKEQW
LLAMRVPDSLDDVEVVQHRFESLDQEMNSLMGRVLDVNHTVQELVEGGHPSSEEVRSCQD
HLNSRWNRIVELVEQRKEEMSAVLLVENHVLEVAEVRSQVREKRRAVESAPRAGGALQWR
LSGLEAALQALEPRQAALLEEAALLAARFPTQAARLHQGAEELGAEWGALAGAAQACGEA
VAAAGRLQRFLHDLDAFLDWLVRAQETAGGSEGPLPGSLEEADALLARHAALKEEIDRRE
EDYARIVAASEALLANDSAELGPGLALDEWLPHLEVGWHKLLGLWEERREALVQAHVYQL
FLRDLRQALAVLCNQEMALSGVELPGTVEAVEEALKRHRDFLTTMELNQQKMQVAVQAAE
GLLRQGNVYGEQAQEAVTRLLEKSQENQLRAQHWMQRLHDQLGLQHFLRDCHELDGWIHK
KMLMARDGTREDSHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKPELAASVRK
KLGEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDRKLLHMESQLQDVDPGGDLA
TVNSQLKKLQSMESQVEEWYREVGELQAQTAALPLEPASKELVGERQNAVGERLVRLLEP
LQERRRLLLASKELHQVAHDLEDELAWVQERLPLAMQTERGSGLQAVQQHIKKNQGLRRE
IQAHGPRLEEVLERAGALASLRSPDAEAVRRGLEQLQSAWTGLREAAERRQHALDAAFQV
EQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIAQLSRQ
CRALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRGGLEQQYWLYQLSRQVDELEHWI
AEKEVVAGSPELGQDFEHVSVSRESRSGDNTSWPGDVSSVEVLMNYHQGLKTELEARGPE
LSACQELGRSLLLNKSAMADEIQAQLDKLGARKEEVLDKWDRHWEWLQQMLEVHQFAQEA
VVADAWLTAQEPLLQSRELGSSVDEVEQLIRRHEAFRKAAAAWEERFSSLRRLTTIEKLK
AEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPAGYEKGLEPLARRASDTLSAEVRTRVG
YVRQELKPERLQPRIDRLPEVPGRAEATGPPATPEDTAETSRTPSTPAAVVAATEQARPS
PRPERQESAERAEELPRRRRPERQESVEPSEEAARRRRPERQESTEQHEAAHSLTLGRYE
QMERRRERRERRLERQESSEQETPTRGDLARGKATLADIVEQLQEKETGPGLPAGPSLPQ
PRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPRDGGEGGGSRRSRSAPAQGGS
APAPPPPPTHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLSKGELGFYKDSKGPASGG
THGGEPLLSLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMNGWLEAVANSVA
EHAEIARWGQTLPTTSSTDEGNPKREGGERERRASGRRK
NT seq
7140 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggtgccaggggaagtggacaacatggaggggctgcctgcctccaacaacaac
aacaacccagccacgcgctgggacagcccagagcggggctgggagcgggagccgcctgca
gcctccaccacagccgcttcgctcttcgagtgctcccggatcaaggccttggcagatgag
cgggaggcagtgcagaaaaagactttcaccaagtgggtgaactcccatctcgcccgcgtg
ggatgccacatcggggacctctacgcggacctccgagatggcttcgtgctcacccggctc
ctggaagtgctgtctggagagcagctgcccagacctacgcgtggtcgtatgcggatccac
tcgttggagaatgtggacaaggcgctgcagttcctgaaggagcagcgcgtgcacctggag
aatgtgggatcacacgacatcgtggacggaaaccaccggctgacgctggggctggtgtgg
accatcatcctgcgcttccagattcaagtgatcaaaattgagacggaggacaacagggag
acgcgctcggccaaggatgccctgctcttgtggtgtcagatgaagacagcaggttacccg
gaggtaaacatccagaatttcaccaccagctggcgggacggcttggcattcaatgctctc
attcaccggcacaggcccgatctcgtggacttcagcaaactcaccaagtccaatgccaac
tacaacctgcagagggccttccgcacagctgagcagcacctggggctggcccggctgctg
gaccctgaagatgtgaacatggaagctccagatgagaaatccatcatcacctatgttgtc
tccttctaccactacttctccaagatgaaggcactggctgtggaggggaagcggatcggg
aaggtcctggaccaggtgttggaggttggaaagatcatcgagcgctacgaagagctggca
gccgaactgctggcctggattcaccgcactgtgggcctcatcagcaaccagaagtttgcc
aactcactgagcggggtgcagcagcagcttcaggcattcacagcctactgcacgctggaa
aagccggccaagtttcaagagaaggggaacttggaggtactactcttcagcatccagagt
aagctccgagcctgcaaccgtcgcctgtttgtacctcgggagggctgtggcatctgggac
atcgacaaggcctggggccagctagaaaaggcagaacatgagcgagaggctgccctacgg
gccgagttgattcgacaggagaagctggaactactggctcaaagatttgaccacaaagtg
gccatgagagagagctggctgaatgagaaccagcgcctcgtatcccaggacaactttggg
tatgagctgccagccgtggaggcagccatgaagaaacatgaagccatcgaagcagacatt
gctgcatatgaggaacgggttcagggtgtggcagagctggcccaggcactggcggccgaa
ggctactatgatgcccggagggtggcagcccagcgtgacagcgtcctgcgccagtggacc
ctgcttacagggctggtgggtgcccggcggacacggctcgaacagaacttggccctgcag
aaagtcttccaggagatggtgtacatggtggactggatggaggagatgcaggctcagcta
ctgtcccgggagtgtgggcagcacctggtagaggcggaggacctgctgcagaagcacggg
ctgctggagggggatattgctgcccagagtgagcgggtggaggccctcaacgctgctgcc
ctgcgtttctcccagctgcagggataccagccctgcgacccgcaggtcatctgcaaccgt
gtgaaccacgtgcacggctgtctggcagagctgcaagagcaggccgctcagcggcgtggg
gagctggaggcctcgcggagcctgtgggcgctgctgcaggagctggaggaggccgagagc
tgggcgcgcgacaaggagcgcctcctggaggcagcgagcggcggggcgggcgcagcgggt
cccgcgggcggcgcgcacgacctgtccagcaccgcgcgcctgctggcgcagcacaagatc
ctgcagggcgagctgggcgggcgccgggtgctgctgcaacaggcactgaggcgcggcgag
gagctggctgccgccggcgggacagtgggcccgggcgcagagatggtgcacttagccggc
ctggcggagcgcgcggcgagcgcacggcgtcgttggcagcggctggaggaggcggcggcg
aggcgcgagcggaggttgcaggaggcgcgggcgctacaccagttcggcgctgatctcgat
gggctcctggactggcttcgcgacgcgtaccgcctcgcagccgccggcgactttggccac
gacgaagcgtccagccgccgcctggcgcgccagcaccgcgcgctcactggggaggtggag
gcgcatcgcgggtccgtgggcggcctgcggcgccagttggcgacactgggaggcgccagc
ggggctgggccgctggtggtggcgctacaggtgcgcgtggtagaggcggagcagctgttc
gccgaggtgacagaggtggctgcgctgcggcgccagtggttgcgggacgcgctcgccgtc
taccgcatgttcggcgaggtgcacgcgtgtgaactgtggatcggcgagaaagagcaatgg
ctgctcgccatgcgcgtgcctgattcactagatgacgtggaggtggtgcagcaccggttt
gagagcctggaccaggagatgaacagtctgatgggccgtgtcctggacgtgaaccacacg
gtgcaggagctggtggagggcggccaccccagctcagaggaggtgcgctcctgccaggac
caccttaacagcaggtggaaccgcatcgtggagctggtggaacagcgcaaagaggagatg
agcgcggtgttgctggtggagaatcatgtgctggaagtggccgaggtgcgctcccaggtg
cgcgagaagcggcgagctgtggagagcgccccccgcgctggcggggccttgcaatggcga
ctgagcggcttggaggccgcattgcaagcgctcgagccgcgccaggcggcccttctggag
gaggcggctctgctggctgcgcggttcccgacacaggcggcgcggctgcaccaaggcgcc
gaggagctgggcgccgagtggggcgcgctggccggcgctgcccaagcgtgcggtgaggcg
gtggcggcagccgggcgtctgcagcgcttcctgcacgacctggacgccttcctggactgg
ctggtgcgcgcccaggagacggcgggcggcagcgaggggccgctgcccggcagcctggag
gaggcagacgcgctgctagcgcgccatgcggcgctcaaggaggaaatagaccgacgcgag
gaggactacgcgcgcatcgtggcggccagcgaggcgctgctggccaacgacagcgcagag
ctgggccccggcctggcgctcgacgagtggctgccgcacctcgaagtgggctggcataag
ctgctgggtctgtgggaggagcgccgcgaggcgttggtacaggcgcacgtctaccagctg
ttcctgcgcgacctccgccaggcgctcgcagtgctctgcaaccaggagatggcgctgtct
ggggtggagctcccaggcacagtggaagctgtggaagaggcgctgaaacggcaccgggat
ttcctcaccacaatggagctgaaccagcagaagatgcaggtggcggtgcaggccgcggag
ggcttgctgaggcagggcaatgtctatggggagcaggcccaggaggctgtgacccggctg
ctggagaagagccaagaaaaccaacttcgggcccagcactggatgcagagacttcacgac
caactcggtctgcagcacttcctccgagactgccacgagctggatggctggatccacaag
aagatgctgatggcgcgcgatggcacgcgggaggacagccacaagctgcacaagcgatgg
ctccggcaccaggccttcatggccgagctggcccagaataaggagtggctggagaagatc
gagagggagggccagcaactgatgcaggagaagccggagctggcagcctcagtgcggaag
aaactgggtgagatccgccagtgctgggccgagctggagagcaccacccaggccaaggcc
cgccagctgtttgaggccagcaaggcagaccagctggtgcagagcttcgccgagctggac
aggaagctcctgcacatggagagccaactgcaggacgtggaccccggcggggacttggcc
accgtcaacagccagctcaagaagctgcagtcgatggagtcgcaggtggaggagtggtac
cgcgaggtgggagagctgcaagcgcagaccgcggcgctgccgctggagccggcgagcaag
gagctggtgggcgagcggcagaacgcggtgggcgagcgcctggtgcgcctgctggagccg
ctgcaggagcgccgtcgcctgctgctcgcctccaaggaactgcatcaggtggcgcacgac
ctggaggacgagctggcctgggttcaggagcgactgccactggccatgcagacagaaaga
ggcagcggtttgcaggctgtgcagcagcacatcaaaaagaaccagggactgcggcgggag
atccaagcccacgggccgcgactggaggaggtgctggagcgcgcgggcgcgctggcgtcc
ctgcgcagccccgacgccgaggccgtgcgccggggcctggagcagttgcaaagcgcctgg
accggcctgcgggaggcggcggagcggcggcagcacgcgctggacgccgccttccaggtg
gagcagtactacttcgacgtggccgaggtggaggcgtggctgggcgaacaggagctgctc
atgatgagtgaggacaagggcaaggacgagcagagcactttgcagctgctgaagaagcac
ctgcagctggagcagggagtggagaactacgaggaaagcatcgctcagctgtcgcgccag
tgccgggcgctgctggagatggggcaccctgacagcgagcagataagccggcggcagtcc
caggtggaccgcctgtacgtggccctcaaggagctgggcgaggagcgcaggggcggcctg
gagcagcagtactggctgtaccagctcagccgccaggtggatgaactcgaacactggatc
gcagaaaaggaggtggtggccggctcgcctgagctgggtcaggacttcgagcatgtctcg
gtgagtagagagagccgcagcggtgacaacaccagttggccgggggatgtgtcgtccgtg
gaggtgcttatgaattaccaccagggcctgaagacggagttggaggcacggggccccgag
ctgtccgcctgccaggagttgggacgctccctgctgcttaacaagagtgccatggctgat
gagatccaggcacagctggacaagctgggagccaggaaggaggaggtgttggacaagtgg
gaccgccactgggagtggctacagcagatgctggaagtgcaccagtttgcacaggaggcg
gtggtcgcggacgcctggttgacggcccaggagccactgctgcagagccgggagctgggc
agcagtgtggacgaggtggagcaactcatccgcaggcacgaggccttccgcaaggcggct
gccgcctgggaggagaggttcagctccctgcggcgcctcaccacgatcgagaaactcaaa
gcagaacagagtaagcagcctcccacgccgctgctggggcgcaagttcttcggggacccc
acggaattggcggccaaggcggcgcccctgctgcggcccgcgggctacgagaagggcttg
gagcccctggcccgccgggcctcggacacgctgtcagcagaggtgcggacccgggtgggc
tatgtgcgccaggagctcaagcccgagcgcctccagccgcgcattgaccggctgcccgag
gtcccgggcagggcagaggccacgggtccaccggccacgcctgaggacacggccgagacc
tctaggactccctcgacccccgcggcggtagtggcggcgaccgagcaggcccggccatca
ccgcgacccgagcgtcaggaatccgccgagcgcgcggaggagctgcccaggcggcggcgg
ccagagcgccaggagtcggtggagccctcggaggaggcagcccggaggcggcggcccgag
cggcaggagtcgacggagcagcacgaggcggcacacagtctcaccttgggccgctacgag
cagatggagcggcggcgcgagcgacgggagcggaggctggaacgacaggagtccagcgag
caggaaacgcccaccaggggcgacctggctagggggaaggccactctggctgacatcgtg
gaacagttacaggagaaggaaaccggcccagggctccccgctgggccgtcgctgcctcag
ccacgcgagcttccccctggccgcctgcccaatggcctggagccacctgagcggacacct
cggcccgaccggcctcgggcacgggaccggcccaagcctcgccggcggccgaggcccaga
gatgggggcgagggcgggggcagccggcgctcgcgctccgccccggcccagggcggctct
gcccccgcaccgccaccgccacccacgcacacggtacagcacgagggtttcctgctgcgc
aaacgcgagcttgacgccaaccgcaagtcctcgaaccggtcgtgggtgagcctgtactgc
gtgctcagcaaaggggaactgggcttctacaaagactccaaagggccagcctcggggggc
acccatggcggagagcccctgctcagcctgcacaaggccaccagcgaggtggccagtgac
tacaagaagaaaaagcacgtcttcaagctccagacccaggatggcagcgagtttttgctg
caagctaaagatgaggaggagatgaatggctggctggaggccgtggccaactcggtggca
gagcacgcggagatcgcccgctggggccagacgctgcccaccacgtcgtccacggatgag
ggcaaccccaagcgggagggcggggagcgggagcgcagggccagcgggcgccggaagtga
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integrated database retrieval system
