Ochotona princeps (American pika): 101533141
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Entry
101533141 CDS
T07609
Symbol
XRCC5
Name
(RefSeq) LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
101533141 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opi03400
]
101533141 (XRCC5)
DNA repair and recombination proteins [BR:
opi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
101533141 (XRCC5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_C
Ku_PK_bind
DUF6005
Motif
Other DBs
NCBI-GeneID:
101533141
NCBI-ProteinID:
XP_012781115
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All DBs
Position
7:97683764..97790592
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AA seq
738 aa
AA seq
DB search
MARSWNKAAVVLCVDVGFAMGNAFPGEESPFEQAKKVMTMFVQRQVFAESKDEIALVLFG
TDDTKNALAAEAQYQHITVHRHLMLPDFDLLEDIDSKIQPGSQQADFLDALIVCMDVIQR
ETVGKKFEKRHIEVFTDLSSPFSKDQLDIIIHNLKKSGISLQFFLPFPVGKEGGTGDRGD
GLPLDRHGPSFPPKGITEQQKEGIQMVKMMMVSLEGEDGLDEIYSFSESLRQLCVFKKIE
KRSMAWPCQLTIGSNLAIKIVAYKSIVPEKVKKTWIVVDARTLKKEDIQKETVYCLNDDD
ETEVAKEDTLQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCRSSQVQRKFFMGNQV
LKVFAAKDDEAAAVALSSLIHALDELDMVAIVRYAYDRRSNPQVGVAFPYIKDAYECLVY
VQLPFMEDLRQYMFSSLKNTKYTPTEAQLSAVDALIDSMSLVRKDEEEDTIEDLFPTTKI
PNPEFQRYFQCLLHRALHPQEPLPPVQQHILNMLDPPAEVTTKSKTALSKIKALFPLTEV
IKQKDQVTAQDIFKDNHEEGHAAKKLKTEEGAVCFSVSSLAEGRVTSVGSVTPAENFRVI
LRQRNASFEEASHQLINHINQFLETNETPYFMKSIDCIKAFREKAIEVGRPHRPLFLEEV
GARVEAKKMESDXFFVSALFSVNCISDGITLISKDEACGSSVTAEEAKQFLAPKEKPSED
ATALCGEGGDVDDLLDMM
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggtcctggaataaggcagccgttgtgctctgtgtggatgtaggctttgccatg
ggcaatgcctttcctggagaagaatctccatttgaacaagcaaagaaggtgatgaccatg
tttgtccagcgacaggtttttgccgagagcaaggatgagatagctttagtcctgtttggt
accgatgacaccaagaacgcccttgctgccgaggctcagtatcagcacatcaccgtgcac
agacacctgatgctgccagattttgatctgttggaagacatcgacagcaaaattcaacca
ggttctcagcaagctgacttcctggatgcactgattgtgtgcatggatgtgattcagcgt
gaaactgtaggaaagaagtttgagaagaggcatattgaagtcttcactgacctcagcagt
ccattcagcaaggatcagctggatattatcatccataacttgaagaagtctggcatctcc
ctgcaattctttttgccttttccagttggcaaggaaggtggaactggggacagaggagat
ggcttacccttggaccgtcatggaccctcttttcctccaaaaggaattactgagcagcaa
aaggaaggcattcagatggtgaaaatgatgatggtatctctagaaggtgaagatgggctg
gatgaaatttattccttcagtgagagtctgagacagctgtgtgtttttaagaaaattgag
aagcggtccatggcttggccctgtcaactgaccattggctccaatttggctataaagatt
gtggcctataaatctattgtaccagagaaagtaaagaagacttggatagttgtggatgca
agaaccctaaaaaaggaagacatacagaaagaaacagtttattgcctgaatgatgatgat
gagactgaagtagcaaaagaggacactcttcaagggttccgctatggaagtgatataatc
cctttctctaaagtggatgaggaacaaatgaaatataaatcggaggggaagtgcttctct
gtcctaggattttgtagatcttctcaggtccagagaaaattcttcatgggaaaccaagtt
cttaaggtctttgcagcaaaagatgatgaggctgcagcggttgcgctctcatccctaatt
catgccctggatgaactggacatggtggccatagtccggtatgcttatgacagaagatca
aatcctcaagttggtgtggcattcccttatatcaaggatgcctatgagtgtttagtgtat
gtgcagctgcctttcatggaagatttacggcaatacatgttttcatccttgaaaaatact
aagtacacacccacagaggcacagctgagtgctgttgatgctttgattgactccatgagc
ttagtaagaaaagatgaagaggaagacaccattgaagacttgtttccaaccaccaaaatc
ccaaatcctgaatttcagagatattttcagtgtctgctgcacagagccttacaccctcag
gagcctctgcctccagttcagcagcatattttgaatatgctggatccccctgctgaggtg
actacgaaatctaagactgctctctcaaaaataaaggcccttttccctctaactgaagtc
atcaagcaaaaggatcaagtcactgctcaggacattttcaaagataatcatgaagaagga
catgctgctaaaaaattgaagactgaagaaggggcagtgtgcttcagtgtctccagcctg
gccgaaggccgagtcaccagtgtgggaagtgtgactcctgctgagaacttccgtgttata
ctgagacagaggaatgccagctttgaggaagcgagtcaccagcttataaaccacatcaat
cagtttctggaaacgaatgaaacgccgtattttatgaagagcatcgattgcatcaaagcc
ttccgggagaaagccatcgaggtaggccgtcctcaccgtcccctcttcctggaagaggtg
ggagcaagggtggaggcaaagaaaatggaatcggattgattctttgtgtctgcattgttc
tctgtgaattgcatttcagatggaattactctgatcagcaaagatgaagcctgtggaagc
tctgtcacagctgaggaagccaaacagtttctggcccccaaagaaaaaccaagtgaagat
gccacagccctgtgtggggaaggaggtgacgtggacgatttactggacatgatgtag
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