Ochotona princeps (American pika): 101533222
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Entry
101533222 CDS
T07609
Symbol
CAPN3
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101533222 (CAPN3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
opi01002
]
101533222 (CAPN3)
Enzymes [BR:
opi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
101533222 (CAPN3)
Peptidases and inhibitors [BR:
opi01002
]
Cysteine peptidases
Family C2: calpain family
101533222 (CAPN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
101533222
NCBI-ProteinID:
XP_004578202
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All DBs
Position
17:55827996..55869484
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AA seq
820 aa
AA seq
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MPTAISASVAPQTGAEPRSPGPVSHPAQGKTTEAGGGNPSGIYSAILSRNFPIIGVKEKT
FEQLHKKCLEKKVLYLDPEFPPDETSLFYSQKFPIQFVWKRPPEICENPRFIIGGANRTD
ICQGDLGDCWFLAAIACLTLNERLLFRVIPHDQSFTENYAGIFHFQFWRYGDWVDVVIDD
CLPTYNNQLVFTKSNHRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFE
IKDAPRDMYKIMRKAIERGSLMGCSIDDGTNMTFGTSPSGLNMGELIARMVRNMDNSLLR
DSDLIPQGSDDRPTRTIVPVQYETRMACGLVRGHAYSVTGLEEALFKGEKVKLVRLRNPW
GQVEWNGSWSDGWKDWSFVDKDERARLQHQVTEDGEFWMSYEDFIFHFTKLEICNLTADA
LESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYRLKLLEEDDDPDDSEVICSF
LVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMHGNKQHLQKDFFLYNASKARSKTYINM
REVSQRFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEAENTISVDRPVKKKKAK
PIIFVSDRANSNKELCVDQESEGKDKTSPDKQEPSPQPQPGNTNWESEEQQQFRNIFKQI
AGDEMEICADELKNVLNTLVKKDQDLKMQGFTLESCRSMIALMDTDGSGRLNLQEFHHLW
KKIKAWQKIFKCYDTNHSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYADKHMNIDFDS
FICCFVRLEGMFRAFHAFDKDGDGVIKLNVLEWLQLTMYA
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgccaactgccattagtgcatctgttgccccccaaacgggggctgagcccagatcccca
gggccagtttcccatccagcccagggcaagaccaccgaggctgggggtggaaacccaagt
ggcatctactcagccatcctcagccgcaatttccccatcattggagtcaaagagaagaca
ttcgagcaactacacaagaagtgcctggagaagaaggtcttgtatctggaccccgagttc
ccgccggatgagacatccctcttttatagccagaagttccccatccagtttgtctggaag
cgacctccggagatctgcgagaacccccggttcatcattggtggagccaacagaactgac
atctgccagggagacctaggggactgctggttcctcgcagccatcgcctgtctcaccctg
aacgagcggctgcttttccgtgtcatcccccatgatcagagcttcaccgagaactatgca
ggcatcttccacttccagttctggcgttatggagactgggtcgatgtggtcatcgatgac
tgcctgccaacctacaataatcaactggttttcaccaaatctaaccaccgcaatgagttt
tggagtgctctgctggagaaggcttatgccaagctacatggctcctatgaggctctgaaa
ggtgggaacaccaccgaggccatggaggacttcaccggaggggtgaccgagttcttcgag
atcaaggatgctccccgggacatgtacaagatcatgaggaaggccattgagagaggctcc
ctcatgggctgctccattgatgatggcaccaacatgacctttggaacctctccttctggt
ctcaacatgggggagttgattgcacggatggtgaggaatatggataactcgctgctcagg
gactcagacctcataccacaaggctcagatgacagaccaacccggaccatcgtccctgtc
cagtatgagacaagaatggcttgtggcctggtcagaggtcatgcctactcagtcacaggg
ctagaggaggccctgttcaaaggtgagaaagtgaagttggtgcgcctacggaacccttgg
ggccaggtggagtggaatggctcttggagtgacggctggaaggactggagcttcgtggac
aaagacgagagggcccgtctacagcaccaggtcactgaggatggggagttttggatgtca
tatgaggacttcatcttccacttcactaagctggagatctgcaacctcacggctgatgcc
ctggagtctgacaagctccagacctggaccgtgtcggtgaatgagggccgctgggtgcgg
ggctgttctgctggaggctgtcgcaacttcccagacacgttttggaccaacccccagtac
cgactgaagctcctggaggaggacgacgatcctgacgactcagaggtgatctgcagcttc
ctggtggccctgatgcagaagaaccggcggaaagaccgcaagctgggggccaacctcttc
accatcggcttcgccatctacgaggttcccaaagagatgcacgggaacaagcagcacctg
cagaaggactttttcctatacaacgcctccaaggccaggagcaagacctacatcaacatg
cgagaggtgtcccagcgcttccgcttgcctcccagcgaatatgtcattgtgccctccacc
tatgagccccaccaggagggtgagttcatcctgagggtcttctcagaaaagcggaacctc
tcagaggaagctgagaatacaatctccgtggaccgacctgtgaagaagaaaaaagccaag
cccatcatcttcgtttcagacagagcaaacagcaacaaggagctgtgtgtggaccaggag
tctgagggcaaagacaaaacaagccctgataagcaggagccgtccccacagccacagcct
ggcaatactaactgggaaagtgaagagcagcagcagttccggaacatcttcaagcagata
gcaggcgatgaaatggagatctgtgcagatgaactcaagaatgtccttaacacattggtg
aaaaaagatcaggacctgaagatgcaggggttcacactggagtcctgccgaagcatgatc
gcactcatggataccgatggctctggaaggctgaacctgcaagagttccatcacctctgg
aagaagatcaaggcctggcagaaaattttcaagtgctatgacacaaaccattctggaacc
atcaacagctatgagatgcggaatgctgtcaatgatgcagggtttcacctcaacagccag
ctctatgacatcatcaccatgcgctacgcagacaagcacatgaacatcgacttcgacagc
ttcatctgctgcttcgtccggctggagggcatgttcagagcctttcatgcatttgacaag
gatggagatggtgtcatcaaactcaatgtgctggagtggctgcagctcaccatgtacgcc
tga
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