Ochotona princeps (American pika): 101533373
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Entry
101533373 CDS
T07609
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04120
Ubiquitin mediated proteolysis
opi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101533373 (SYVN1)
04120 Ubiquitin mediated proteolysis
101533373 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101533373 (SYVN1)
Enzymes [BR:
opi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101533373 (SYVN1)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101533373 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-Nse
zf-C3H2C3
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
101533373
NCBI-ProteinID:
XP_004596744
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All DBs
Position
1:complement(109293148..109305945)
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AA seq
613 aa
AA seq
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MFRTAVMMVASLALTGVVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLAILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPAAPEPADQGQPPAPHPA
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSAEATAAPSTSAAALPRPSGA
ASTTAASAGDTPATSTPAPGAGPAPGFPFPPWMGMPLLPPFAFPPMPVPPAGFAGLTPEE
LRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPAPVPVSPTEELA
PPVAASAAPSTSASFPSTEASTPSAGVSPAAPETAKAPAPESLGTEEPPEDGEPDAAELR
RRRLQKLESPAAH
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggtggccagcttggcgctgaccggggtcgtggtggcc
cacgcctactacctcaaacaccagttctaccccaccgtggtgtacttgaccaagtccagc
cccagcatggccgtcctgtacatccaggccttcgtcctcgtcttcctcttgggcaaggtg
atgggcaaggtctttttcgggcagctgagggccgcagagatggagcaccttctggaacgt
tcctggtacgctgtcactgagacgtgtctggctttcactgtttttcgggatgacttcagc
ccccgctttgtggcgctctttactctcctcctcttcctcaaatgtttccactggcttgct
gaggaccgagtggactttatggagcgcagccccaatatctcctggctgtttcactgtcgc
atcgtctcccttatgtttctcctggctatcctggacttcctcttcgtcagccatgcctat
cacagcatcctaacccgcggggcctccgtgcagctggtgtttggctttgagtatgccatc
ctcatgaccatggtgctcaccatcttcatcaagtacgtgctgcactcggtggacctgcag
agcgagaacccctgggacaacaaggccgtgtacatgctctacacggagctgttcactggc
ttcatcaaggtcctgctgtacatggccttcatgaccatcatgatcaaggtgcataccttc
ccgctgttcgccatccggcccatgtacttggccatgaggcagttcaagaaagcggtaaca
gatgccatcatgtcacgccgggccatccgcaacatgaacacgctgtacccagatgccacc
ccagaggagctgcaggcgatggacaatgtctgtatcatctgccgggaagagatggtgacc
ggagccaagcgactgccctgcaaccacatcttccacaccagctgcctgcgctcctggttc
cagcggcagcagacctgtcccacctgccggatggatgtcctccgggcatcactgccggcc
cagtccccggcagcccccgagcctgcagatcaggggcagcctcctgccccccatcctgca
cccctcctgccccaaccccccaacttcccccagggcctgctgcccccttttcctccaggc
atgttccctctctggccccccatgggcccctttccaccagttccaccaccccccagctca
gcagaggccacagctgctccgtcaactagcgcagcagccctacctcggcccagtggggca
gcctctaccaccgctgccagcgctggcgacactccggccacctccaccccagcccctggt
gctggcccggcccctggcttccccttcccaccttggatgggcatgcctcttctgccaccc
ttcgcctttcccccaatgcctgttccccctgcgggcttcgccgggctgacccccgaggag
cttcgggctctggagggccacgagcggcagcacctggaggcccggctgcagagcctgcgc
aacatccacacgctgctggacgctgccatgctgcagatcaaccagtacctcactgtgctg
gcctccctggggcccccccggccggccccagtaccagtgagccccactgaggaactggcc
cctcccgtggctgcctccgccgccccctccacctctgccagcttccccagcaccgaggcc
tccaccccatccgctggagtgtccccagcagcccctgagactgcaaaagctccagctccc
gagtccctgggcaccgaggagccccctgaggatggagagcccgacgcagccgagctccgc
cgccgccgcctgcagaagctggagtcccccgcggcccactga
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