Ochotona princeps (American pika): 101533399
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Entry
101533399 CDS
T07609
Symbol
TPM2
Name
(RefSeq) tropomyosin beta chain isoform X1
KO
K10374
tropomyosin 2
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04260
Cardiac muscle contraction
opi04261
Adrenergic signaling in cardiomyocytes
opi04814
Motor proteins
opi04820
Cytoskeleton in muscle cells
opi05410
Hypertrophic cardiomyopathy
opi05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
101533399 (TPM2)
04820 Cytoskeleton in muscle cells
101533399 (TPM2)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
101533399 (TPM2)
04261 Adrenergic signaling in cardiomyocytes
101533399 (TPM2)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
101533399 (TPM2)
05414 Dilated cardiomyopathy
101533399 (TPM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
opi04812
]
101533399 (TPM2)
Cytoskeleton proteins [BR:
opi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
101533399 (TPM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
ERM_helical
TMF_DNA_bd
PUMA_CC
DUF3450
Snapin_Pallidin
DUF7179
ATG16
DASH_Duo1
Suppressor_APC
ADIP
XhlA
Motif
Other DBs
NCBI-GeneID:
101533399
NCBI-ProteinID:
XP_004581064
LinkDB
All DBs
Position
1A:32075782..32083249
Genome browser
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQALQKKLKGTEDEVEKY
SESVKDAQEKLEQAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEDSDRKYEEVARKLVILEGELERSE
ERAEVAESRARQLEEELRTMDQALKSLIASEEEYSTKEDKYEEEIKLLEEKLKEAETRAE
FAERSVAKLEKTIDDLEETLATAKEENVEIHQTLDQTLLELNNM
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatcaagaagaagatgcagatgctgaaactggacaaggagaacgccatcgac
cgcgccgagcaggccgaggccgacaagaagcaagccgaagaccgctgcaagcagctggag
gaggagcagcaagccctccagaagaagctgaaagggactgaggacgaggtggagaagtac
tccgagtcggtgaaggacgcccaggagaagctcgagcaggctgagaagaaggccacggac
gctgaagcagatgtggcctctctgaaccgccgcatccagctggtagaggaagagctggac
cgggcacaagagcgcctggccactgccctccagaagctggaggaggctgagaaggcagct
gacgagagcgagagagggatgaaagtcatcgagaacagggccatgaaggatgaggagaag
atggaactgcaggagatgcagctgaaggaggccaaacacatcgccgaggactcggaccgc
aaatatgaggaggtggccaggaagctggtgatcctggaaggagagctggagcgctcggaa
gagagagctgaggtggccgagagtcgagccaggcagctggaggaggaactccgaaccatg
gaccaggccctcaagtccctgatagcctcggaggaggagtactccaccaaagaggacaag
tatgaagaggagatcaagctgctggaggagaagctgaaggaagctgagacccgggcagag
tttgcagagaggtctgtggcaaagctggagaaaaccatcgatgacctggaagagaccttg
gccactgccaaggaagagaacgtggagatccaccagaccctggaccagaccctgttggag
ctcaacaacatgtga
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