Ochotona princeps (American pika): 101533640
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Entry
101533640 CDS
T07609
Symbol
PHF20
Name
(RefSeq) PHD finger protein 20
KO
K18402
PHD finger protein 20
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101533640 (PHF20)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
101533640 (PHF20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHF20_AT-hook
PHD_5
Tudor_3
PHD
MBT
Tudor_2
SH3_Hsr9
DUF4537
YgxA-like_sub_bind
Tudor_5
Tudor-knot
Zf-C2H2_ZNF451_1st
Motif
Other DBs
NCBI-GeneID:
101533640
NCBI-ProteinID:
XP_004585833
LinkDB
All DBs
Position
4A:22460742..22532671
Genome browser
AA seq
1009 aa
AA seq
DB search
MTKHPPNRRGISFEVGAQLEARDRLKNWYPAHIEDIDYEEGKVLIHFKRWNHRYDEWFCW
DSPYLRPLEKIQLRKEGLHEEDGSSEFQINEQVLACWSDCRFYPAKVTAVNKDGTYTVKF
YDGIVQTVKHIHVKAFSKDQNIVGNARPKETDDKSLSPSPDKQVKFKEQRKAVVRVKKDK
EDKAFKAEKRPRQPDKEGKLICCEKGKAAEKSLPKNEKEDKENISENDREYSRDSQVDKK
PEDDIVKSPQEKLREPKRRRGRPPSIAPTAVDSNSQTLQPITLELRRRKISKGSEVPLKR
PRLDKNSSQEKSKNYTEKAEKDLSRRRSSRLSTSGTHEILDPDLAGSDLVDRVDADPLHH
ITSDVKESEEGRLKSPLDAGQVSSALTCHSFGNGSGAAGLELNCKSMGENTMKTEATSPL
AELREISTVEVTNTFKKTNDSVTSNVSAGDLNHKFRCKVVDCLKFFRKAKLLHYHMKYFH
RMEKSPEPEESPGKRHVQTRGSSALDKPSQESLTRKRVSASSPTAKDKEKSKEKKFKEFV
RVKPKKKKKKKKKVRSECPCSEEVSDTSQDPSPPKAFAVTRCGSSHKPGVHLSPQLHGSE
SGNHKGKVKAPEEDNVSESSSESFLWSDEEYSQDVDGPPNPDEELDGDDHYDFEVVRCIC
EVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRPGFKYWYDKEWLS
RGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPDLQLW
CQPWKQHSGEGRVPSTHIHIMDPRSKEEDPSYRTLNGAVEKPPPRSVEESYITSEHCYQK
PRAYYPAVAQKLVVETRGSALDHAVNPLHENGDDPLSPRLGWPLDQDRSTGDSHPKPSSP
KVRDCISKSVLPEETPARKLLDRGGEGLLSSQHQWQFNLLTHVESLQDEVTHRMDSIEKE
LDVLESWLDYTGELEPPEPLARLPQLKHCIKQLLTDLGKVQQIALCCST
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagcatccacctaacagacgaggaatcagctttgaagtgggagcccagttggaa
gcccgggaccgtttaaaaaactggtatccagctcacatagaagacattgactacgaagaa
ggaaaagtgctcatccatttcaagcgttggaatcatcgttatgatgagtggttctgctgg
gacagtccctatttacgtccgttagagaaaatacagctgaggaaggagggcttacatgaa
gaggatggatcttctgaatttcaaataaacgagcaagttcttgcttgctggtctgactgc
cgtttttacccagccaaagtcactgctgttaacaaggatggtacttacactgtgaaattt
tatgatggcatagttcagactgtcaaacatattcatgtcaaagctttttccaaagatcag
aatattgtgggtaatgctaggcctaaagaaacagatgacaaaagtctttcaccatctcct
gacaaacaagtgaagtttaaagagcagagaaaagctgtggtcagagtgaagaaagacaaa
gaggacaaagccttcaaggctgaaaagcgacccaggcaacctgacaaagaaggaaagtta
atctgttgtgaaaagggaaaggcagcagagaaaagccttcccaagaacgagaaggaagac
aaagagaacatttcagagaatgacagggagtattccagagacagccaggtggataagaag
cctgaagacgacattgtgaagagtccgcaggagaagctgagagagccaaaaagaagacga
ggccgacccccttccatagctcctacggcagtagattcaaactctcaaactttgcaacca
ataacattggaattgagaagacggaaaatatcaaagggaagtgaagttccattaaaacgt
cctcgacttgacaaaaattcatcccaggaaaagtcaaaaaactatacagaaaaggctgag
aaagacttatccaggagacggtcctccaggctgtccactagtgggactcacgagatccta
gatcctgacttggctggatcagatttggtggatcgagttgatgcagatcctttgcatcac
ataacgtctgatgtcaaggagtctgaagaaggtcgtttgaaatctccattggacgctggc
caggtctcatcagcactaacttgccactcctttgggaatgggtccggggctgcaggcctg
gaactgaactgcaagtcaatgggagaaaacactatgaaaactgaggcaacttctcctctt
gctgaattacgagagatttccacggtggaagtaacaaatacatttaagaaaacaaatgat
tctgtgacatctaacgtatcggctggggacctgaaccacaagtttaggtgcaaagttgtg
gactgtctaaaatttttccgcaaagccaagctattgcactaccacatgaagtatttccat
agaatggagaagtcacctgagccagaggagagcccaggcaagaggcacgtccagacgaga
ggctcttcagctttggacaagcccagccaggagagcctaacgaggaagcgtgtttcagcc
agttccccaactgcaaaagacaaggaaaagagtaaggagaagaaattcaaggagtttgtg
agagtgaagccaaagaagaaaaagaaaaagaaaaagaaagtcagatctgaatgtccctgt
agtgaagaggtcagtgacacctcccaggatccttctccacccaaggcattcgctgtcacc
aggtgtgggtcttcacataagcctggcgtccatttgagccctcagcttcatggctcagag
tctggaaaccacaaagggaaagtgaaagcacctgaagaggataatgtcagtgagtcttct
tctgagagcttcctttggagtgatgaggagtacagccaggatgtcgatgggccccccaac
ccggatgaagaacttgatggggatgaccactatgattttgaagtggtccgctgcatctgt
gaagtccaggaagaaaatgacttcatgattcagtgtgaagagtgccagtgctggcagcat
ggggtctgcatgggattactggaagaaaatgtgcctgagaaatacacctgttatgtttgc
caagaccctccaggtcagaggcctggattcaagtactggtatgacaaggagtggctgagc
aggggacacatgcatggcctggcatttctagaagaaaactactcccatcagaatgctaag
aaaattgtggccacacaccagcttcttggcgatgtgcagagagtgattgaggttctgcac
ggcctgcagcttaagatgagcatcttacaaagcagggagcaccccgatctgcagctgtgg
tgtcagccctggaagcagcactcaggggagggtcgagttccctccacacacatccacatc
atggaccccaggagcaaggaggaggaccccagctacagaactttgaacggggcagtggag
aagcccccaccccgatctgtggaggagtcctatatcaccagcgagcattgctaccagaag
ccccgtgcctactaccctgctgtggcgcagaagctggtggtggagacacggggctctgcc
ctggaccatgcagtcaacccgctgcatgagaacggcgacgaccccctctccccacgtctg
ggctggcctctagaccaagacaggagcacgggtgacagtcaccccaaacccagctccccg
aaggtgagagactgtatctccaaaagtgtcctcccagaagaaacccctgcacggaagctg
ctggacagaggcggagaggggctgctgagctcgcagcaccagtggcagtttaacctgctg
acccacgtggaatctctgcaggatgaagtcacacacaggatggactccattgagaaagag
ctggatgtgttggagagttggctggactacactggggagctggagcccccagagccgctg
gccaggctcccgcagctcaagcactgcatcaagcagctgctcacagacctgggcaaggtg
cagcagattgccctctgctgctctacatga
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