Ochotona princeps (American pika): 101533749
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Entry
101533749 CDS
T07609
Symbol
SLAMF1
Name
(RefSeq) signaling lymphocytic activation molecule
KO
K06536
signaling lymphocytic activation molecule family member 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
opi04517
IgSF CAM signaling
opi05162
Measles
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
101533749 (SLAMF1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101533749 (SLAMF1)
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
101533749 (SLAMF1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
opi04515
]
101533749 (SLAMF1)
04090 CD molecules [BR:
opi04090
]
101533749 (SLAMF1)
Cell adhesion molecules [BR:
opi04515
]
Immunoglobulin superfamily
SLAM/CD2 family
101533749 (SLAMF1)
CD molecules [BR:
opi04090
]
Proteins
101533749 (SLAMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLAM
Ig_3
Ig_2
TRIC
Motif
Other DBs
NCBI-GeneID:
101533749
NCBI-ProteinID:
XP_004589150
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All DBs
Position
13:complement(120088434..120125717)
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AA seq
340 aa
AA seq
DB search
MDTNRPLSWSLLLVLSLVFGLSYGSGGGVINCPKNVQQLGSSVWLPLTNEWINKSMNKSI
RIVVTMAKSPESSVKKKIVSLDLSEGGSSRYIEQGYKFHLDDLNLELLESRKEHEGWYFI
TLEENTAVQQFCVQLNLYEQVSTPEIKVLNRSQESENGTCNLMLVCTVQKGDHVVYNWSK
KEGLHPFSSANSSQLLHLTLGPQHADNIYNCTVSNPISTSFQAFNPWSMCRSDSSDTRRW
GLYIGLFLGGVVVAIMALEVIILLFRKKGKANHYQSTTGEKSLTIYAQVQKPGPPEKTPE
TLPTQDPCTTIYVAASDPVPESVQEPNPITVYASVTLPES
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggataccaacagaccactctcctggagcctcctgctggtcctgtccctggttttcgga
ttgagctatggatcaggtgggggtgtgataaactgcccaaagaatgtccagcagttggga
agcagtgtgtggctgcccttgacaaatgagtggataaataagagcatgaataaaagcatc
cgcattgttgtcaccatggcaaaatcaccagaaagcagcgtcaagaagaaaatagtatct
ttggatctttctgaggggggctcttcacgatacatcgagcaaggctataagtttcacttg
gacgacctgaacctggaactcttggaaagcaggaaggaacatgagggatggtactttata
accctggaagaaaatactgctgtccagcaattttgcgttcagctcaatctttatgagcag
gtctccactccagaaattaaagtgctaaacaggtcccaggagagtgagaatgggacctgc
aacttgatgctggtgtgcacagtacagaaaggggaccatgtggtttacaactggagtaag
aaagaaggcctccacccattcagctcagccaacagctcccagcttctgcacctcaccctt
ggcccccagcatgctgacaatatctacaactgcaccgtgagcaaccccatcagcaccagc
tttcaggccttcaacccatggtccatgtgcaggtcagactcgtcagatacaagacgatgg
ggactgtatattggactgttcttagggggcgtcgttgtggcaatcatggctctcgaggtg
atcatactattgttcagaaaaaaaggcaaagctaaccattatcaatctacaacgggagag
aagagccttactatctatgcacaagtccagaaaccaggtcctcctgagaagacacctgag
accctaccaacccaggacccctgtaccaccatttatgtggctgcctcagatcctgtgcca
gagtctgttcaggaacccaatcccatcacagtctatgccagtgtgacacttccagagagc
tga
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