Ochotona princeps (American pika): 101533816
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Entry
101533816 CDS
T07609
Symbol
CAPRIN1
Name
(RefSeq) caprin-1
KO
K18743
caprin-1
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101533816 (CAPRIN1)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
101533816 (CAPRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
101533816
NCBI-ProteinID:
XP_004585662
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All DBs
Position
1:87268934..87306940
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AA seq
731 aa
AA seq
DB search
MRAGWPCRAGVRAGQPRSHVARPPRPRGPAKSLPLPALASLGAAVGAAGTGHSGLAPTGR
ATLPGTHRHPFAPLSGPLEISSGLHARTVSASPDRGGAEGEKRAAAPSVLLPPDRGKLDD
YQERMIKGERLNQDQLVCYVFIAQIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDK
LGDDEVRTDLKQGLNGVPILSEEELSLLDEFYKLVDPERDMSLRLNEQYEHASVHLWDLL
EGKEKSVCGTTYKALKEIVERVFQSNYFDSTHNHQNGLCEEEEAASAPPAEDQVTEAEPE
PTEEYTEQSEVESTEYVNRQFMAETQFSSGEKEQVDEWTVETVEVVNSLQQQPQAASPSV
PETHSLAPVAQADPLVRRQRVQDLMAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPT
QSMDMPQLVCPPVHSESRLAQPNQVPVQAEATQVPLVSSTSEGYTASQPLYQPSHATEQR
PQKEPIDQIQATISLNADQTTASSSLPAASQPQVFQAGTSKPLHSSGINVNAAPFQSMQT
VFNMNAPVPPVNEPETLKQQNQYQASYNQSFSSQPHQVEQTELQQEQLQTVVGPYHGSQD
QPHQVTGNHQQPPQQNSGFPRNNQPYYNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDG
YRPSFSNTPNTGYTQSQFSAPRDYSGYQRDGYQQNFKRGSGQSGPRGAPRGRGGPPRPNR
GMPQMNTQQVN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccggctggccctgccgggcaggcgttcgcgccgggcagccccgctcgcacgtc
gcccgccccccgcgccctagagggccggctaagtccctcccgctgccggctctcgcctca
ctaggagcggctgtcggtgcggcgggcacagggcacagcggccttgcgcccacgggacgc
gcgacattgcccggaacacaccgccacccctttgccccccttagcggcccactcgagatc
tccagcggcctccacgcgcgcacggtgagcgccagcccggaccgaggaggcgccgaaggg
gaaaagagggccgctgcgccgagtgtccttttacctccggatcgcggcaagctggatgat
taccaggaacgaatgatcaaaggggaaaggcttaatcaagatcaactggtgtgttatgtt
tttattgcccagattcagaaaacgataaagaagacagctcgtcgggagcaacttatgaga
gaagaagctgagcaaaaacgtttaaaaactgtacttgaactgcagtatgttttggacaaa
ttgggcgatgatgaagtgcgaactgacttgaaacaaggtttgaatggagtgccaatactt
tctgaagaggagttgtcactattggatgaattttataagttggtagaccctgaacgagac
atgagcttgaggttgaacgaacagtatgagcatgcctctgttcacttgtgggacttgctg
gaggggaaagaaaaatctgtgtgtggaacaacttataaagctttaaaagaaattgttgag
cgtgtttttcagtccaactattttgacagcacccacaaccaccagaatgggctgtgtgag
gaagaggaggcagcctcagcacctccagctgaagaccaagtgactgaagctgaacctgag
ccaacagaagaatacactgaacaaagtgaagttgaatcaacagagtatgtaaatagacaa
tttatggcagaaacacagttcagcagtggtgaaaaggagcaggtagatgagtggacagtt
gaaacagtcgaggtggtgaattcactccagcagcaaccccaggctgcatctccttcagta
ccagagacgcattctttggctcctgtggctcaggccgacccccttgtgaggagacagcga
gtacaggatctgatggcacagatgcaggggccctataatttcatacaggattcaatgctg
gactttgagaaccagacacttgatcctgctattgtatctgcacagcctatgaatccaacg
caaagcatggacatgccccagctagtctgccctcctgttcattctgaatctagacttgct
caacctaatcaggttcctgtacaggcagaagccacacaggttcctttggtttcatccaca
agtgagggatacactgcctctcaacccttgtatcagccttctcatgccacagaacaacgg
ccacaaaaggaaccaattgatcagattcaggcaacgatttctttaaatgccgatcagact
acagcatcatcgtcccttcctgctgcttcccagcctcaggtgttccaggctgggacaagc
aagcctttgcatagcagtgggatcaatgtgaatgcagctccattccagtccatgcaaacg
gtattcaatatgaatgctcccgtgcctcctgttaacgaacctgaaactttaaaacaacaa
aaccaataccaagccagttacaaccagagcttttccagtcagcctcaccaagtggaacaa
acagagctccagcaagaacagcttcaaacagtggttggaccttaccacggttcccaggac
cagcctcatcaggtgactggcaaccaccagcagcccccacagcagaatagtggatttcca
cggaacaatcagccgtactacaacagtcgtggtgtgtctcgtggaggctcccgtggtgct
agaggcttgatgaatggataccggggccctgccaatggattcagaggaggatatgatggt
taccgcccttcattctctaacactcctaacactggttacacacagtctcagttcagtgct
ccccgggactactctggttatcagcgggatggatatcagcagaatttcaagcgaggctct
gggcagagtggaccacggggagccccacgaggtcgtggagggcccccaagacccaacaga
gggatgccgcaaatgaacactcagcaagtgaattaa
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