Ochotona princeps (American pika): 101533822
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Entry
101533822 CDS
T07609
Symbol
MEFV
Name
(RefSeq) pyrin
KO
K12803
pyrin
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04621
NOD-like receptor signaling pathway
opi04623
Cytosolic DNA-sensing pathway
opi05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101533822 (MEFV)
04623 Cytosolic DNA-sensing pathway
101533822 (MEFV)
09160 Human Diseases
09171 Infectious disease: bacterial
05135 Yersinia infection
101533822 (MEFV)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101533822 (MEFV)
Membrane trafficking [BR:
opi04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
101533822 (MEFV)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PYRIN
PRY
zf-B_box
DUF4455
PhaP_Bmeg
C2c1_helical
zf-B_box_ZFPL1
HEAT_GCN1_2
TetR_C_4
GP24_25
7TMR-HDED
Motif
Other DBs
NCBI-GeneID:
101533822
NCBI-ProteinID:
XP_004587109
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All DBs
Position
6:complement(7427362..7436604)
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AA seq
568 aa
AA seq
DB search
MARTLSDHLLNTLEDLVPYDLEKFKFKLQNISLEKQHSRIPRGQLQMARPVELATLLVTY
YGKEYAVRLTLQVLRAINQRLLAEELRKVTGQGKPQGKAACSLCHAQKGDPVGGTCRHGV
CSCSPVPGHLRASGNPLHICLQCQASLAWKNSPELSPQSLPQCQRHMKQVQLLFCEDHRE
PICLICRLSQEHQGHRVRPLEEVALEYREQIQQQLERLRQLRQSGEEQRSQGAEQMESLL
KQTETQKQRIRSQVEQLFKFLEHQEQLFAAWLDELGQTISQVREKYGTQVSCDIALLDKL
IGELEAQQCQPEWELVQGIGVTLHRAKAMTVPEPWVTPPEVREKIHLLYRKSEFIEKSMK
YFSETLRSEMETFNVPELIAAQAYAVNMTLDTKTSHPNLIFSDNLKSMRLGNKWDRLPEG
SERFDSCIIALGNPSFLSGRHYWEVEVTDKTTWMLGVCKASVSRKGSMTLSPENGYWVMM
MKQNEYQVSSSPPSRLKMREPPRRVGVFLDYMTRNISFYNVTARSHIYTFTGFSSSGPLQ
AIFSPGGHDGGKNTGPLTICPVSSQRPH
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggccaggactctgagtgatcacctgctgaacaccctggaggacttggtgccctatgac
cttgagaagttcaagtttaagctgcaaaacatcagcctggaaaaacagcactcccggatt
ccccggggccagctgcagatggccaggccagtggagctggccaccctgctggtcacctac
tacgggaaggagtacgccgtgcggctgaccctgcaggtcctgcgggccatcaaccagcgt
ctcctggccgaggagctccgcaaagtgactggccaggggaagccacagggcaaggctgca
tgttccctctgccacgcccagaaaggagacccagttggtggtacctgcaggcacggcgtc
tgcagctgctctcctgttcctgggcacctcagggcctccggcaaccccttgcatatctgc
ctgcaatgtcaggcctccctggcatggaagaactccccagagctgagccctcagtccctg
ccacagtgtcagcgccacatgaagcaggtccagctgctcttctgcgaggaccacagggag
cccatttgcctcatctgtaggctgagtcaggagcaccaaggccaccgtgtgcgccccctg
gaggaggtcgccctggagtacagggagcagattcagcagcaactggaacgtctgcggcag
ctgagacagtctggggaggagcagaggtcccagggagctgagcagatggagagcctcctg
aaacaaactgaaacccagaaacagagaatccggagccaggtggagcagcttttcaagttt
ctggagcatcaagagcagctgtttgcggcctggctggatgagctgggccagaccattagc
caggtccgggagaaatatggcacccaagtgtcctgtgacatcgcccttctggacaagctg
attggggagctggaagcccagcagtgccagccagaatgggagctcgtgcagggcatcgga
gtcaccttgcacagggccaaggccatgactgttcctgagccatgggttactcctccagag
gtgagagaaaagatccacctgctctaccggaagtcagagtttatagagaagagcatgaag
tacttctcagaaacactgcgttcagaaatggaaacattcaatgttccagaactgattgct
gcacaggcatatgctgttaatatgaccctggatacaaaaacctcacaccccaacctcatc
ttctctgacaatttgaagagcatgagacttggaaacaagtgggaccgacttccggaaggc
tcagagagatttgacagctgcatcattgctctgggcaaccccagcttcctctccggccgc
cattactgggaagtggaggtcacagacaagacaacctggatgctgggggtctgcaaggcg
tccgtgagcaggaaggggagcatgactttgtcacccgagaatggctactgggtgatgatg
atgaagcagaatgagtaccaggtgtcttcctcccctccgagccgcctgaagatgagggag
cctccgaggcgtgtgggcgtcttcctagactacatgaccagaaacatctccttctacaac
gtgacagccaggtcccacatatacacattcaccggtttctcttcctctggcccccttcaa
gctatcttcagccctgggggacacgatggggggaagaacacaggtcctctgaccatctgt
ccagtgagtagtcaacggcctcactga
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