KEGG   Ochotona princeps (American pika): 101533822
Entry
101533822         CDS       T07609                                 
Symbol
MEFV
Name
(RefSeq) pyrin
  KO
K12803  pyrin
Organism
opi  Ochotona princeps (American pika)
Pathway
opi04621  NOD-like receptor signaling pathway
opi04623  Cytosolic DNA-sensing pathway
opi05135  Yersinia infection
Brite
KEGG Orthology (KO) [BR:opi00001]
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    101533822 (MEFV)
   04623 Cytosolic DNA-sensing pathway
    101533822 (MEFV)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    101533822 (MEFV)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:opi04131]
    101533822 (MEFV)
Membrane trafficking [BR:opi04131]
 Autophagy
  Other autophagy associated proteins
   TRIM-directed selective autophagy
    101533822 (MEFV)
SSDB
Motif
Pfam: SPRY PYRIN PRY zf-B_box DUF4455 PhaP_Bmeg C2c1_helical zf-B_box_ZFPL1 HEAT_GCN1_2 TetR_C_4 GP24_25 7TMR-HDED
Other DBs
NCBI-GeneID: 101533822
NCBI-ProteinID: XP_004587109
LinkDB
Position
6:complement(7427362..7436604)
AA seq 568 aa
MARTLSDHLLNTLEDLVPYDLEKFKFKLQNISLEKQHSRIPRGQLQMARPVELATLLVTY
YGKEYAVRLTLQVLRAINQRLLAEELRKVTGQGKPQGKAACSLCHAQKGDPVGGTCRHGV
CSCSPVPGHLRASGNPLHICLQCQASLAWKNSPELSPQSLPQCQRHMKQVQLLFCEDHRE
PICLICRLSQEHQGHRVRPLEEVALEYREQIQQQLERLRQLRQSGEEQRSQGAEQMESLL
KQTETQKQRIRSQVEQLFKFLEHQEQLFAAWLDELGQTISQVREKYGTQVSCDIALLDKL
IGELEAQQCQPEWELVQGIGVTLHRAKAMTVPEPWVTPPEVREKIHLLYRKSEFIEKSMK
YFSETLRSEMETFNVPELIAAQAYAVNMTLDTKTSHPNLIFSDNLKSMRLGNKWDRLPEG
SERFDSCIIALGNPSFLSGRHYWEVEVTDKTTWMLGVCKASVSRKGSMTLSPENGYWVMM
MKQNEYQVSSSPPSRLKMREPPRRVGVFLDYMTRNISFYNVTARSHIYTFTGFSSSGPLQ
AIFSPGGHDGGKNTGPLTICPVSSQRPH
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggccaggactctgagtgatcacctgctgaacaccctggaggacttggtgccctatgac
cttgagaagttcaagtttaagctgcaaaacatcagcctggaaaaacagcactcccggatt
ccccggggccagctgcagatggccaggccagtggagctggccaccctgctggtcacctac
tacgggaaggagtacgccgtgcggctgaccctgcaggtcctgcgggccatcaaccagcgt
ctcctggccgaggagctccgcaaagtgactggccaggggaagccacagggcaaggctgca
tgttccctctgccacgcccagaaaggagacccagttggtggtacctgcaggcacggcgtc
tgcagctgctctcctgttcctgggcacctcagggcctccggcaaccccttgcatatctgc
ctgcaatgtcaggcctccctggcatggaagaactccccagagctgagccctcagtccctg
ccacagtgtcagcgccacatgaagcaggtccagctgctcttctgcgaggaccacagggag
cccatttgcctcatctgtaggctgagtcaggagcaccaaggccaccgtgtgcgccccctg
gaggaggtcgccctggagtacagggagcagattcagcagcaactggaacgtctgcggcag
ctgagacagtctggggaggagcagaggtcccagggagctgagcagatggagagcctcctg
aaacaaactgaaacccagaaacagagaatccggagccaggtggagcagcttttcaagttt
ctggagcatcaagagcagctgtttgcggcctggctggatgagctgggccagaccattagc
caggtccgggagaaatatggcacccaagtgtcctgtgacatcgcccttctggacaagctg
attggggagctggaagcccagcagtgccagccagaatgggagctcgtgcagggcatcgga
gtcaccttgcacagggccaaggccatgactgttcctgagccatgggttactcctccagag
gtgagagaaaagatccacctgctctaccggaagtcagagtttatagagaagagcatgaag
tacttctcagaaacactgcgttcagaaatggaaacattcaatgttccagaactgattgct
gcacaggcatatgctgttaatatgaccctggatacaaaaacctcacaccccaacctcatc
ttctctgacaatttgaagagcatgagacttggaaacaagtgggaccgacttccggaaggc
tcagagagatttgacagctgcatcattgctctgggcaaccccagcttcctctccggccgc
cattactgggaagtggaggtcacagacaagacaacctggatgctgggggtctgcaaggcg
tccgtgagcaggaaggggagcatgactttgtcacccgagaatggctactgggtgatgatg
atgaagcagaatgagtaccaggtgtcttcctcccctccgagccgcctgaagatgagggag
cctccgaggcgtgtgggcgtcttcctagactacatgaccagaaacatctccttctacaac
gtgacagccaggtcccacatatacacattcaccggtttctcttcctctggcccccttcaa
gctatcttcagccctgggggacacgatggggggaagaacacaggtcctctgaccatctgt
ccagtgagtagtcaacggcctcactga

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