Ochotona princeps (American pika): 101533844
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Entry
101533844 CDS
T07609
Symbol
TSPEAR
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
opi03037
]
101533844 (TSPEAR)
04990 Domain-containing proteins not elsewhere classified [BR:
opi04990
]
101533844 (TSPEAR)
Cilium and associated proteins [BR:
opi03037
]
Other cilia and associated proteins
Stereociliary proteins
101533844 (TSPEAR)
Domain-containing proteins not elsewhere classified [BR:
opi04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
101533844 (TSPEAR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
101533844
NCBI-ProteinID:
XP_012784959
LinkDB
All DBs
Position
14:complement(121681188..121819195)
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AA seq
665 aa
AA seq
DB search
MSALLAWCVLLLPLATPGRGARRWEPCTDLRPLDILAEVVPSHGTPDGVRVVQAQGSWGL
QLQAATPHALSFPASRFFFRCDLFPEEFSIVMTLKPPHLPAKRNQYLLTVLSQDRDVLLL
GLRYSASQLHFLFLSEDGAWQTRVSFRSPALADGQWHTLVLAVSEGSFSLTTDCGLPMDI
VADVPFPATLSVRGAWFFVGSRRRAKGLFTGLVRQLVLLPGSDATPQLCPSRNAQLAVLS
IPQVLQDPAEENEVLKYPYETDVKITLGSQPPCTKVEGGQFWFDVSRKGLYLCVGSRWIS
VLAAKERLDYVEEHQRLPTHSETLGLEVFRIPEVGLFAAAANRQAKSAIYKWTDGRFETY
QSIRTHQAQSWSHFSIGKQIFLAVANFAPNDRGQEFSVIYRWSPRRRKFTPYQRISTHSA
RDWEAFQVDGEHFLAVANHREGDNHNIDSIIYKWNPRTRLFEAHQSIATSGAYDWEFFTV
GPYSFLAVANTFNGTSTKVHSHLYIWLVGSFQLFQSFLTFGAADWEVFHIGERLFLAVAN
SQSYDVETQVQNDAYVINSVIYELNVTAQTFVKFQDIPTCSALDWEFFSVGDDYFLVVAN
SFDGSTFLVDSVVYRWQGYEGFVAAHSLPTFGCRDWEAFSTPAGSYLIYSSAKEPLSRVL
RLRTR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccctgctggcgtggtgcgtcctgctgctgccactggccacccccggccgcggc
gcccggcgttgggagccctgcacagacctgcgacccctggacatcctggcagaggtggtc
ccgtcgcatggcaccccagacggagtcagggtggtgcaggcgcaggggtcgtggggcctt
cagctccaggccgccaccccccacgccctgagcttcccagcatccaggttcttcttcaga
tgtgacctcttccctgaagaattctccatcgtcatgaccttgaagcccccccacctccca
gccaagaggaaccagtatctgctcaccgtgctgtcccaggacagggacgtcctgctgctc
ggcctgcgctactcggcctcccagctgcacttcctgttcctcagcgaggacggcgcctgg
cagacccgcgtgtccttccgcagccccgcgctcgccgatggccagtggcacacgctggtc
ctggctgtgtccgaaggctccttctcgctcaccaccgactgtggcctcccgatggacatc
gtagcggacgtgccctttcctgccaccctgtcggtgcgaggagcctggttcttcgttggc
agcaggagacgagccaaggggctgttcacaggcctggtgaggcagcttgtcctactgcca
ggctcggacgccacaccacagctgtgtcccagcaggaatgcccagctggccgtgctgtcc
atcccacaggtgctacaggaccctgcagaggaaaacgaggtgctaaaatacccctatgaa
acagacgtgaagataactctgggatcccagccaccctgtaccaaggtggaaggcggccag
ttctggtttgacgtcagccggaaggggctgtacctgtgcgtcggcagcaggtggatctca
gtgctggcagccaaggagaggctggactatgtggaggaacaccagcgcctgcccacgcac
tcagagacgcttggcctggaggtgtttcgcatccccgaggtggggctcttcgcggccgcc
gccaaccggcaggccaagtcagccatctacaagtggacggacggacggttcgagacctac
cagagcatccgtacacaccaggctcagtcctggagccatttcagcatcgggaagcagatc
ttcctggctgtggccaacttcgcacccaacgaccggggccaggagttctcagtcatctac
aggtggagcccccggagacgcaagttcaccccataccagcgcataagcacccacagtgcc
cgtgactgggaggcgttccaggtggacggcgagcacttcctggctgtggctaaccaccgg
gaaggcgacaaccacaacattgacagcatcatctacaagtggaacccccggacgcggctc
ttcgaggcccaccagagcattgccacatcgggcgcctacgactgggagttcttcaccgtg
gggccctactccttcctggccgtggccaacaccttcaacggcacctccactaaggtgcac
tcccacctgtacatctggctcgtcggctccttccagctcttccagtccttcctgacattc
ggtgctgcggactgggaggtcttccacattggggagcgactgttccttgccgtcgccaac
agtcaaagctatgacgtggagacgcaggtgcagaacgacgcctacgtcatcaactcggtc
atctacgagctgaatgtcaccgcacagacctttgtcaagtttcaggacatccccacctgc
agcgccctggactgggagttcttctcggtgggagatgattatttcctggtggtcgccaac
tcctttgatgggagcaccttcctggtggacagtgtcgtgtacaggtggcagggctacgag
ggcttcgtggccgcccacagcctgcccaccttcggctgccgggactgggaggccttcagc
acgcccgcgggctcctacctcatctactccagcgccaaggagcccctgtccagggtgctg
cgactcaggacccgctga
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