Ochotona princeps (American pika): 101533872
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Entry
101533872 CDS
T07609
Symbol
TGIF1
Name
(RefSeq) homeobox protein TGIF1 isoform X1
KO
K19383
homeobox protein TGIF1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
101533872 (TGIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101533872 (TGIF1)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
101533872 (TGIF1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
101533872
NCBI-ProteinID:
XP_004579680
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Position
9:46311977..46319828
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AA seq
272 aa
AA seq
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MKSKKGVVVASGSDTEDEDNTDIPLDLSSSACSGKRRRRGNLPKESVQILRNWLYEHRYN
AYPSEQEKALLSQQTHLSQLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISEA
SSMESAVSIKSFMPALEESPFHSCTAGPSPILGRPLSPKPPSPGSILARPSVICHTTVTA
LKDVPFPLCQSVGVGQNTDIQQIAASSFTDSSLVYPEDTCKSGPSTNTQSGLFNTPPPTP
PDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaagaaaggtgtcgtggtggcttccggcagtgacactgaggatgaggacaac
acggacattccgttggacctttcctcttcagcctgctcaggcaagaggaggcgaaggggc
aacctgcccaaggagtctgttcagattctccggaactggctgtatgagcaccgatacaat
gcctatccctcggagcaggagaaagccttactgtcccagcagacacacctctcccagcta
caggtctgtaactggttcatcaacgcccgccgcaggctcctccctgacatgctgagaaag
gatggcaaggatccaaatcagttcacaatatcccgccgtggggccaagatttctgaagca
agctctatggagtctgcagtgagcatcaaaagcttcatgccagctctcgaggagagcccg
ttccattcctgtacagctggacccagcccaatcctagggaggccactgtctcctaagcca
ccatccccgggatcaattttggctcgtccgtcggtgatctgccacaccactgtgactgca
ttgaaagatgtgcctttccctctctgccagtcagttggtgtgggacaaaacacagatatc
cagcagatagcagccagcagttttacagacagctcactcgtgtacccagaggacacgtgc
aaatccggaccgagtacaaacacacagagtggtcttttcaacactcctcccccaactcca
ccagacctcaaccaggacttcagtgggtttcagctgctcgtggatgttgcactcaaaagg
gctgcagagatggagcttcaggcaaagcttacggcgtaa
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