Ochotona princeps (American pika): 101533968
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Entry
101533968 CDS
T07609
Symbol
WDR47
Name
(RefSeq) WD repeat-containing protein 47
KO
K24746
WD repeat-containing protein 47
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
opi04990
]
101533968 (WDR47)
Domain-containing proteins not elsewhere classified [BR:
opi04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
101533968 (WDR47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
LisH_TPL
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
TPR1-like_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
101533968
NCBI-ProteinID:
XP_004582217
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Position
13:complement(96295492..96387763)
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AA seq
880 aa
AA seq
DB search
MTAEETVNVKEVEIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQ
WDEVLQFIQPLECMEKFDKKRFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVQC
LHALEEYCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTARVHCFEEVCVMVAEFIPADR
KLSEAGFKASNNRLFQLVMKGLLYECCVEFCQSKATGEEITESEVLLGIDLLCGNGCDDL
DLSLLSWLQNLPSSVFSCAFEQKMLNIHVDKLLKPTKAAYADLLTPLISKLSPYPSSPMR
RPQSADAYMTRSLNPALDGLTCGLTSHDKRISDLGNKTSPMSHSFANFHYPGVQNLSRSL
MLENTECHSIYEESPERSDTPVEAQRPIGNEILGQSSASEKEPANGAQNPGPAKQEKNEL
RDSTEQFQEYYRQRLRYQQHLEQKEQQRQIYQQMLLEGGVNQEDAPDQPQNLTEQFLSRS
IQKLGELNIGMDSLGSDVSAVSQQCNGNKGNGSNNSSVASFATPPQDSGQRVTHDTSHIH
TSTPRNPGSANHIPFLEESPSCGGQTSSEPSVIKPPLSDSSGSLSRSREEDDKSKKQFVC
INTLEDTQAVRAVAFHPSGSLYAVGSNSKTLRVCAYPEVIDPRQTYGLVVKLGIVKINTG
PDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHIL
ALYTWSGWMIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQ
EDSSCMLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQL
PIMVVGEHKDKVIQCRWHTQDLSFLSSSADRTVTLWTYSG
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagaagaaacagtgaatgtaaaagaggttgagataatcaagctaattttggac
ttcctgaactcaaagaagcttcacattagtatgttggcacttgagaaggaaagtggagtc
ataaatggtctgttttcagatgatatgcttttcctgaggcagttaattcttgatggccaa
tgggatgaagttcttcagttcattcaacctctggaatgtatggaaaaatttgacaaaaaa
agatttcgttatattatcctgaagcagaagtttttagaagctttatgcgttaacaatgca
atgtcagcagaagatgagccccagcatctggaatttaccatgcaagaagctgtgcaatgt
ttacacgctctagaggagtactgtccttctaaagatgactatagcaagctttgtttgctt
ttgactttgcctcgtttgaccaatcatgccgaatttaaggactggaatcccagcactgca
cgagttcactgttttgaagaagtttgtgtcatggttgcggaattcatccctgctgatagg
aagctaagtgaagctggtttcaaagcaagtaataaccgcttatttcagcttgtgatgaaa
ggcctactttatgagtgctgtgtagaattttgtcagagtaaagcaactggagaagagatt
acagaaagtgaagtcctgcttggcattgacctgctgtgtgggaatggttgtgatgatttg
gatctaagcttattgtcatggcttcagaatctgccatcttctgtcttctcttgtgctttt
gagcagaaaatgcttaatattcatgttgacaaacttctgaaacctacaaaagctgcatat
gctgatcttttaactcctcttatcagcaagctctctccctatccgtcatccccaatgaga
agacctcagtcagctgatgcctacatgacccgctctctgaatcctgctttagatggcctc
acctgtggactgaccagtcacgataagagaatctcagaccttggaaacaaaacttctcca
atgtcacactcctttgctaatttccattacccaggggtgcagaacctcagcagaagtctc
atgcttgagaatacagagtgtcacagtatttatgaagaatcccctgagcgaagtgataca
cctgttgaagcacagcggcctatcggcaatgaaatcttgggccagagttcagcttcagaa
aaagaacctgcaaatggagcacaaaatcctggaccagccaagcaagaaaaaaatgagctt
cgagattcaacagaacagtttcaagaatattaccggcaaagactgcgttatcagcagcat
ttggagcagaaggagcagcagaggcagatataccagcagatgttgctggaaggaggtgtt
aatcaggaggatgctccggatcagccgcagaatctcaccgagcagttcctgagcaggtct
attcaaaagcttggcgagttaaatattggaatggatagccttggtagtgatgtatcagct
gtcagccagcagtgtaatgggaacaaaggcaatggatctaataattcttctgtggctagt
tttgctacaccgccgcaagactctggtcagagagtaacacatgatacttcacatatccac
acaagtactcctcgcaatcctggatctgcaaatcacataccttttcttgaggaatcacct
tcttgtggaggccaaacctcatcagaaccttcggtcattaagccacctctgagtgattct
tcagggagtctgtcaaggtcaagagaagaggatgacaaatcgaaaaaacagtttgtttgt
attaatactctagaagatacacaagctgttagagcggtggcttttcatccaagtggtagt
ttatatgctgttggttcaaactcaaaaactctgagggtgtgtgcctatccggaagtgatc
gatccaagacagacatatggtttagtagtaaagctgggcattgtgaaaataaacacagga
ccggatctggaatttagtatgcatgatgggacaattagagacttggcatttatggaaggc
ccagaaagtggtggtgctattttaataagtgccggagcaggtgattgtaacatttataca
acagattgtcaaagaggacagggcctccatgctttgagtggacatactgggcatatttta
gcactttatacctggagtggctggatgattgcatctggttcccaagataagactgttcga
ttctgggatcttcgagtaccaagctgtgttcgtgttgttggcacaacattccatggaact
ggcagtgccgtggcgtctgtagctgttgatcccagtggccgactcttagccacagggcag
gaggactccagctgcatgttgtacgacataagaggaggcagaatggtacagagttaccac
ccacattccagtgacgttcgctcggttcgattctcccccggagcacactatttactgacg
ggatcctatgacatgaaaataaaggtgacagacctgcaaggggatctcaccaagcagctt
cctattatggtggtgggcgagcacaaggacaaagtgattcagtgcagatggcacacccag
gatctttccttcttgtcgtcctctgcagacagaactgtaaccctctggacttacagtggg
tag
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