Ochotona princeps (American pika): 101534025
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Entry
101534025 CDS
T07609
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04340
Hedgehog signaling pathway
opi04360
Axon guidance
opi05200
Pathways in cancer
opi05205
Proteoglycans in cancer
opi05217
Basal cell carcinoma
opi05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
101534025 (SHH)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101534025 (SHH)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101534025 (SHH)
05205 Proteoglycans in cancer
101534025 (SHH)
09162 Cancer: specific types
05226 Gastric cancer
101534025 (SHH)
05217 Basal cell carcinoma
101534025 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
opi01002
]
101534025 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
opi00536
]
101534025 (SHH)
Peptidases and inhibitors [BR:
opi01002
]
Cysteine peptidases
Family C46: hedgehog family
101534025 (SHH)
Glycosaminoglycan binding proteins [BR:
opi00536
]
Heparan sulfate / Heparin
Morphogens
101534025 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
DUF7764
Motif
Other DBs
NCBI-GeneID:
101534025
NCBI-ProteinID:
XP_004597576
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Position
13A:complement(3207011..3216324)
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AA seq
453 aa
AA seq
DB search
MLLLARCLLVALLSSLLVGSALACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPGV
KLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSASVHLEQGGTKLVKDLSPGDRVLAADDQGRLLYSDFLT
FLDRDDSARKVFYVIETLEPRERLLLTAAHLLFVAPHNDSAAAGEPQVPSGGAPERRALF
ASRVRPGQRVYVMVERDGDRRLLPASVRSVTLHEEATGAYAPLTAQGTILINRVLASCYA
VIEEHSWAHWAFAPFRLAHALLAALQPTRTDRLGDGDGGGGGLMPVPAPGAVDVPGATAP
AGIHWYSQLLYQIGTWLLDSEALHPLGMAVTSS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctggcaaggtgtctgctggtggctctgctctcctcgctgctcgtgggctca
gcactggcgtgcggaccgggcaggggatttggaaagaggcggcatcccaaaaagctgacc
cctttagcctacaagcagtttattcccaacgtggccgagaagaccctaggggccagcgga
agatatgaagggaagatctcaagaaactctgagcgatttaaggaactcacccccaattac
aaccccgacatcatatttaaggatgaggaaaacacgggagcagacaggctgatgactcag
aggtgtaaggacaaactgaacgctctggccatctcggtgatgaatcagtggccaggagtg
aagctccgggtgacagagggctgggatgaggatggtcaccattctgaggaatcgctgcac
tacgagggccgtgccgtggacatcaccacgtctgaccgcgaccgcagcaagtacggcatg
ctggcccgcctggctgtggaagctggcttcgactgggtctactatgagtccaaagcgcat
atccactgctccgtgaaagcagagaactcagtggcggccaaatcgggcggctgcttcccg
ggctccgcctctgtgcacctggagcagggtggcaccaagctggtgaaggatctgagtcct
ggggaccgcgtgctggcggctgacgaccagggccggctgctctacagtgacttcctcact
ttcctggatcgcgacgacagcgccagaaaggtcttttacgtgatcgagaccctggagccc
cgcgagcggctgctgctcaccgccgcgcacctgctctttgtcgcgccgcacaacgactcg
gccgctgcgggggagccccaggtgccgtcggggggcgcgccagaacgccgggcgctcttc
gccagccgggtgcgccctggccagcgcgtgtacgtgatggtcgaacgtgacggggaccgc
cgactgctgccagcctccgtgcgcagtgtgacgctccacgaggaggccacgggagcgtac
gcgccgctcacagcccagggcaccatcctcatcaaccgggtgctggcgtcgtgctacgct
gtcattgaggagcacagctgggcacactgggccttcgcgcccttccgcctggcgcacgcg
ctgctggccgctctgcagcccacgcgtacagaccgcctcggagatggcgacggcgggggc
ggcggcctcatgcccgtgcctgcaccaggtgcggtcgacgtaccaggtgcgacggccccg
gcgggcatccattggtactcgcagctgctctaccaaataggcacctggctgttggacagc
gaggcgctgcaccccctcgggatggcggtcacgtccagctga
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