Ochotona princeps (American pika): 101534031
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Entry
101534031 CDS
T07609
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101534031 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101534031 (LSM1)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101534031 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
101534031 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
101534031
NCBI-ProteinID:
XP_004598567
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All DBs
Position
2A:72276858..72289924
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLERESDTPLQQVSIEEILEEQRVEQQARLEAERLKVQALKER
GLSMPRADTLEEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgcccggcaccgccagcctcattgaggacatcgacaaaaagcacttggtc
ctgcttcgagatggaaggacactgataggctttcttagaagcattgatcagtttgctaac
ttagtgctacatcagactgtggagcgtattcatgtgggcaaaaaatacggtgatattcct
cgagggatttttgtggtcagaggagagaatgtggtgctactaggagaaatagacttggaa
agggagagtgacacaccgctgcaacaggtgtccattgaagagatcctggaggagcagagg
gtggagcagcaggccaggctggaggccgagcggctcaaagtgcaggcgctcaaggaacgc
gggctctccatgccacgggcagacacgctggaggagtattag
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