Ochotona princeps (American pika): 101534052
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Entry
101534052 CDS
T07609
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03020
RNA polymerase
opi04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101534052 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
101534052 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opi03021
]
101534052 (POLR3A)
Enzymes [BR:
opi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101534052 (POLR3A)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
101534052 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
101534052
NCBI-ProteinID:
XP_004583575
LinkDB
All DBs
Position
18:32598154..32647187
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNNHAPLLYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFRAVIGILQMICKSCCHIMLSLE
EKKQFLDYLKRPGLTYLQKRGLKKKISEKCRKKSTCRHCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPVVSTFLQSFETAIEHNKEVEPLLSRAQENLNPLIVLNLFKRIPAEDVPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANIHFLRKLVQNGPEVHPGANF
IQQRHMHMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPTILKPVTLWTGKQI
FSVILRPSDDSQVRANLRTKGKQYCGKGEDLCVNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLTM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVFPCQKEPALSKKELILTTESILKKSEFLC
CQDSFLQEIKKFINGVSERIKKTRDKYGINDNGTTEPRVLYQLDRITPTQIEKFLDTCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICTSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQFLKEDLPKVV
VQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVRGTQTTSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKANRDPNPPKRPLIFD
TNEFHIPLVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaacagtttcgggagacggatgtggccaagaaaataagccacatctgtttt
ggcatgaagtcacctgaggagatgcggcagcaggcacacatccaggtcgtgagcaagaac
ctatacagccaggacaacaaccatgccccgctgctctacggcgtgctggaccacaggatg
gggacaagtgaaaaggaccggccttgtgaaacctgtgggaaaaacttggccgactgcctg
ggccattacggctacattgacctggagttgccatgtttccacgtcgggtacttccgagcc
gtcataggcatcttgcagatgatctgcaaaagctgctgccacatcatgctgtccctggag
gagaagaagcagttcctggactacctgaagaggcccggcctgacctacttgcagaagcga
gggctgaagaagaagatctcggagaagtgccgcaagaagagcacctgccgccactgtggc
gccttcaacggtaccgtgaagaaatgtggattactgaagataatccacgagaaatacaag
accaacaagaaagtggtggatcccgtcgtctccactttcctgcagtctttcgagacagcc
attgaacacaacaaagaagtggagccgctcctgagcagggcacaggaaaacttgaacccc
ttaatagttcttaacttatttaaacgaatcccagccgaagatgtcccgttgcttctgatg
aacccggaagcgggtaagccctccgatttgatcctcacccgactcttggtgccgcccctg
tgtatcagaccctccgtggtgagtgacttgaagtcaggcaccaatgaagatgatctgacg
atgaagttgacagaaatcatcttcctgaatgatgtcattaagaagcatcggatctcgggt
gccaagacgcagatgatcatggaggactgggacttcctgcagctgcagtgtgcgctctac
atcaacagcgagctctcaggcatccccctcaacatggctcccaagaagtggacccggggc
tttgtccagcgcctcaagggcaagcaaggtcggtttagaggcaatctctccggaaagaga
gtggatttttctggcagaactgtcatctcacctgaccccaacctccggattgatgaagta
gctgttccggttcatgtggccaaaattctaacttttcctgagaaggtgaataaagctaac
attcattttttgaggaaattggttcagaatggccctgaagttcacccaggagctaatttc
attcagcagaggcatatgcacatgaaaaggtttctgaaatacgggaatcgagagaagatg
gcccaggagctcaagtacggcgacatcgtggagagacacctgatagatggagacgtggtg
ctcttcaaccggcagccctcgctgcacaagctgagcatcatggcacacctggccagggtc
aagccccaccggaccttccggttcaacgagtgtgtgtgcacaccctacaacgcggacttc
gatggtgatgagatgaacctgcatcttccccagacggaggaggcgaaagcagaggccctt
gtcctgatggggactaaagcgaatcttgtcaccccaaggaatggtgagcccctgattgct
gctattcaggatttcctaacaggtgcctatctcctcactctcaaagacacgttctttgat
cgggccaaggcttgccagatcattgcctccatactggttggcaaggatgagaaaatcaaa
gtccgcctcccaccccctacaatactgaagcctgtcaccctgtggactggcaaacagatc
ttcagtgtcatcctaaggcctagtgacgacagccaagtgagagccaatctgcggaccaag
ggcaagcagtactgtggcaaaggggaagacctgtgtgtcaacgactcctatgtcaccatc
cagaacagcgagttgatgagtggcagcatggacaaagggaccttgggatctggttccaag
aacaacatcttctacatcttgctgcgcgactgggggcagaatgaagccgctgatgccatg
tcacgcctggccaggctggctcctgtgtacctatcaaaccgcggcttctccattgggatt
ggtgatgtcacccctggccaaggactgctgaaagccaagtacgagttgctgaacgctggc
tacaagaagtgtgatgagtacatcgaggccctgaacacaggcaagctgcagcagcagcct
ggctgcacagctgaggaaaccctggaggcgctgatcctgaaggagctgtctgtgatccgt
gaccatgccggcagcgcctgcctccgggagctggacaagagcaacagccccctcaccatg
gctctctgtggctccaaaggttctttcattaacatctcacagatgatcgcctgtgtggga
cagcaagccatcagcggctcccgagtgccggatggcttcgagaacaggtccttgcctcac
tttgagaaacattcaaagcttccagctgccaagggctttgtggctaatagcttttactcg
ggcttaactcccaccgagttcttcttccacacgatggccggtcgggaaggtctggttgac
acagcggtcaagacagccgagacgggttacatgcagagaaggctcgtgaaatcccttgaa
gacctgtgctctcagtatgatttgacagttcgaagctctaccggtgatatcatccagttt
atttacgggggagatggcttggaccctgcagctatggaaggaaaagacgaacctttggag
tttaaaagggtcctggacaacatcagagcagtcttcccgtgtcagaaagagcctgctctc
agcaaaaaggaactgatcctgaccactgaatccatcctgaagaaaagcgagttcctctgc
tgccaggacagcttcctgcaggaaatcaagaaattcattaatggggtttctgagaggatc
aagaaaaccagagataaatacggcatcaatgataatggcacgaccgagccccgcgtgctg
taccagttggatcgcatcacccccacccaaatagagaagtttctggacacctgtcgggac
aagtacatgagagcacagatggagccggggtctgctgtgggtgcactttgtgcccagagc
attggtgaaccaggcacccagatgacgctgaagactttccactttgcgggcgtggcctcc
atgaacatcaccctgggcgtcccccgtatcaaagagatcatcaatgcctccaaagccatc
agcactccaattatcacagcgcagctagacaaggatgacgatgcggactacgctcgcctc
gtgaaagggagaatcgagaaaaccctcttgggggagatttcagagtacatcgaagaagta
tttcttcctgatgactgcttcattctggtcaagctctccctggagaggatcaggcttctc
agactggaagtgaatgctgagactgtacgctactctatctgcacatccaagctgcgtgtg
aagccgggtgatgtggctgttcatggcgaggccgtggtgtgtgtcacccccagagagaac
agcaaaagctccatgtactacgtgctacagttcctcaaggaggatctccccaaggtggtg
gtgcagggcatcccagaagtgtccagagctgtcatccacattgatgagcagagcgggaag
gaaaagtacaaactcctggtggaaggcgataacctgcgggcagtcatggccacccacggt
gtgcgaggcacccaaaccacttccaacaacacctatgaggtggagaagactctgggcatc
gaggcagcccggaccaccatcatcaacgaaatccagtatacgatggtcaaccatggcatg
agcatcgacaggaggcacgtgatgctgctgtctgacctgatgacctacaagggcgaggtc
ctgggcatcacccgctttggcctggccaagatgaaggagagtgtgctgatgctggcttcc
ttcgagaagacagctgaccatctcttcgatgccgcctacttcgggcagaaggactccgtg
tgtggggtgtccgagtgcatcatcatgggaatcccgatgaacattggcacaggcctcttc
aagctgctccacaaggccaacagggacccaaaccctcccaagaggcctttgatcttcgac
acaaatgaattccacatcccccttgtcacgtag
DBGET
integrated database retrieval system
