Ochotona princeps (American pika): 101534100
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Entry
101534100 CDS
T07609
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opi03400
]
101534100 (APEX2)
Enzymes [BR:
opi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
101534100 (APEX2)
DNA repair and recombination proteins [BR:
opi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
101534100 (APEX2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
101534100
NCBI-ProteinID:
XP_004598385
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Position
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AA seq
518 aa
AA seq
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MLRVVSWNINGIRSPIPGVACQELGSCAAVAMGRILGELAADIVCLQETKVTRDVLTEPL
AIIEGYNSYFSFSRNRSGYSGVATFCKDSATPEAAEEGLSGLFATQNGDVGCYGNMDEFT
QDELRALDSEGRALLTQHKIRTQEGQERTLTLINVYCPHADPGKPERLTFKMRFYRLLQI
RAEALLASGSHVIILGDLNTAHRPIDHCDAINMEYFEEDPGRKWMDGLLSNPRCQDGSHG
GPFVDSFRHFQPNQERAFTCWSVVTGARLLNYGSRLDYVLGDRTLVIDTFQSSFLLPEVM
GSDHCPVGAVLSVSSLPAKQCPPLCTRFLPEFAGTQLKIVRFLVPREQAPTLEESASQLS
NQTRTQVRQNKARVRSARPRPNQVGSSRGQKNLMNYFQPSSNHPQTSPDSEPPRQPLADI
PVMPKAPEEEAMAKVVGGQAKASEVKSNKEVQMSFWKSVLGGPSPLPLCAGHKEPCVMRT
VKKPGPNLGRRFYMCARPRGPPTDPSARCNFFLWCMPN
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgagtggtgagctggaatatcaatgggatccggagccccataccaggggtggca
tgccaggagctcggcagctgtgccgcggtggccatgggacgcattttgggcgagctggcc
gccgatatcgtctgtctgcaggagaccaaagtgacgagagatgtgctgactgagcccctg
gctatcattgagggctataactcctatttcagcttcagccgaaaccgaagtggctattcc
ggtgtagccaccttctgtaaggacagcgctaccccagaggctgctgaagaaggcttgagt
ggcctgtttgccactcagaatggggacgtgggttgctatggaaacatggatgaattcacc
caagatgagctccgggctcttgatagtgagggccgggccctcctcacacaacacaagatc
cgtactcaggaaggacaagagaggaccttgaccctaatcaacgtgtactgcccccacgcg
gatcctgggaagcctgaacgactgacctttaaaatgcgcttctatcgcctgctacagatc
cgagcagaagccctcctggcatctggcagccatgtgatcattctgggtgacttgaatact
gcccaccgccccattgaccactgtgatgccatcaacatggaatacttcgaagaggaccca
ggacgcaaatggatggatggcttgctcagtaacccgaggtgtcaggacggctctcatgga
gggccctttgttgacagcttccgccactttcagcccaaccaggagagggctttcacttgc
tggtcggtggtcactggcgcccgtcttctcaactatggttcacggcttgactatgtgctg
ggagacaggaccctggtcatagacactttccagagctccttcctcttgcctgaggtcatg
ggctcagaccactgccctgtgggcgcagtcttgagtgtgtcctctctacctgctaaacag
tgccctcctctgtgtacccgattcctccctgaatttgcaggcactcagctcaagattgtt
cgcttcctagttccccgggaacaagctcctacattggaggagtcagcatcacagctcagc
aatcaaactcggacacaggtacgccaaaacaaagcccgtgtccgctcagccaggcctcgg
ccaaatcaggttggttccagcagaggtcagaagaacctgatgaattacttccagccctcc
tccaaccatcctcaaacctctcccgactcagaaccacctcgccagccactggcagacatc
cctgtgatgccaaaggctccagaagaggaggcgatggccaaagtggttggaggacaggcc
aaagcttcagaagtcaaaagcaacaaggaggtacagatgtcgttttggaagtctgtgttg
gggggaccatcacccttgcccctgtgtgcaggccacaaggagccatgtgtcatgcggact
gtgaagaagccgggccccaacctgggccgccgcttctacatgtgtgccaggccccgaggt
cctcccactgacccctctgcccgctgcaatttcttcctctggtgcatgcccaactga
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