Ochotona princeps (American pika): 101534244
Help
Entry
101534244 CDS
T07609
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101534244 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101534244 (RNF43)
Enzymes [BR:
opi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101534244 (RNF43)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101534244 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
101534244
NCBI-ProteinID:
XP_004591043
LinkDB
All DBs
Position
19:28500771..28565016
Genome browser
AA seq
781 aa
AA seq
DB search
MSGGQQLQLVALWPWLLMATLQAGFGRTGLVLAAAVESERSAEQKAIIRVIPLKMDPTGK
LNLTLEGVFAGVAEITPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPQRAPRPCL
SLASKARMAGERGASAVLFDITEDRAAAEQLQQPLGLTWPVVLIWGRDAEKLMDFVYKNR
KAHVRIELKEPPAWPDYDVWILLTVVGTIFVVILASVLRIRCRPRHSRPDPLQQRTAWAI
SQLATRRYRASCRRARAEWPDSGSSCSSAPVCAVCLEEFSEGQELRVISCLHEFHRTCVD
PWLHQHRTCPLCMFNIVEGDSFSQSLGASRSYQEPGRRLHLIRQHPGHAHYHLPAAYLLG
PSRSPGARPPRPRSFLPSQEPGMGPRAQRLHRATHPQAPGEQQCPAAVQRPYAQGWGPGR
LRCATQHPAACPGPLRRTRPHDSSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVV
NCTDISLQGIHGSSSTFRSSLSSDFDPLVYCSPEGDAQREEPQPNATSRRRSLDSVAPTG
EIQVSSHVHYHRHRHHHYKKRFRWHSRKLGPDTGLPQSRPAAPRTQVQPEPPSLEPQVTK
SDPAAPSGQLPNSQRSRAPMELAPRPAEASNPSPSSLCNLQKSSLPSRHPQRKRRGGPAE
PPLAPRTQDPTAHPACQAVPHFSTSLAYPWPPEAHPLVFRPPGLDRRLLPETPGPCYSSS
QPVWLCLTPRQPLGPHPPGEGPSGWSSDPLGSRPCPYSHCQVLPAQSGTEEELEELCEQA
V
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggccagcagctgcagctggttgccctctggccctggctgctgatggctacc
ctgcaggcaggctttggacgtacaggactggtattggcagcagcggtggagtccgagaga
tcggcagagcagaaagctattatcagagtgatccccttgaaaatggaccccacgggaaag
ctgaatctcactttggaaggtgtgtttgctggtgttgccgaaataactccagctgaagga
aaactgatgcagtcgcaccccctgtacctatgcaatgccagtgacgacgacaatctggag
cctggattcatcagcattgtcaagctggagagcccccagcgggcgccccggccctgcctg
tcgctggccagtaaggcccggatggcaggtgagcgaggagccagtgccgtgctctttgac
atcactgaggaccgagctgctgccgagcagctgcagcaacccctggggctgacctggcct
gtggtgctgatctggggtcgtgatgccgagaagctgatggatttcgtgtacaagaaccgt
aaggcccatgtgaggattgagctgaaggagcccccagcctggccggattatgatgtgtgg
atcctcctgacggtggtgggcaccatcttcgtggtcatcctggcctcggtgctgcgcatt
cggtgccgcccccgccacagcaggccggatcctcttcaacaacgaacggcctgggccatc
agccagctggccacccggaggtaccgggccagctgcaggagggcccgggccgagtggcca
gactcaggcagcagctgcagctccgcccccgtgtgtgctgtctgcctggaggagttctct
gagggccaggagctacgggtcatctcctgcctgcatgaattccatcggacatgtgtggac
ccctggctccatcagcaccggacctgtcccctctgcatgttcaacatcgtagagggagat
tcattttcccagtccttgggagcctctcgatcttaccaggaaccaggccggaggctccac
ctcatccgccagcatcccggccatgcccactaccacctccctgctgcttacctgctgggc
ccttcccgaagtccaggggctcggcccccgcgacctcgttccttccttccatcccaggaa
cctggcatgggtcctcgagcccagcgcctccacagagccacacacccccaggctccaggt
gagcagcagtgtcctgcagcagtccagcgcccctatgcacagggctggggaccaggccgc
ctccgatgtgccacacagcaccctgctgcttgcccagggcccctgcgcaggaccagacct
catgacagcagcggctctggagaaagctactgtactgaacgtagtggctacctggcagat
gggccagccagcgactccagctcagggccctgtcatggctcttccagtgactcagtggtc
aactgcacggacatcagcctgcagggcatccacggcagcagttccaccttccgcagctcc
ctaagcagtgactttgatcccttggtatattgcagccccgaaggggatgcccagcgggaa
gagccgcagcccaacgcaacctccaggcgccgttccttggactcagtggcacccacaggg
gaaatccaagtttctagccacgtccactaccaccgccaccggcaccaccactacaagaaa
cggttccggtggcatagcaggaagcttggcccagacactgggctgccccagtccaggcct
gctgcccctcggacccaggtgcagccagagccaccatctcttgaaccacaagtcaccaag
tccgacccagctgccccttcagggcagctgcccaactcacaacggtccagggctcccatg
gagctggccccccgccctgcagaagcctccaaccccagccccagcagtctttgcaacctg
cagaaatccagccttcccagccggcacccgcagaggaaacgacggggtggccctgcagag
ccacctctggcccctcggacccaggacccaactgcacaccccgcctgccaggctgtcccc
catttcagtaccagcctggcatacccgtggcctccagaggcccacccattagtcttcaga
cctccaggcctggacaggaggctgctaccagaaaccccaggtccctgttactcaagttca
cagccagtgtggttgtgcctgactccacgtcagcccctaggaccacacccacctggggaa
gggccttctggatggagttctgaccccctggggagcaggccatgcccttactcacactgc
caggtgctgccagcccagtctggcacagaagaggaactggaggagctgtgtgaacaggct
gtgtga
DBGET
integrated database retrieval system
