Ochotona princeps (American pika): 101534411
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Entry
101534411 CDS
T07609
Symbol
ITGAE
Name
(RefSeq) integrin alpha-E
KO
K06524
integrin alpha E
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04518
Integrin signaling
opi04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
101534411 (ITGAE)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101534411 (ITGAE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
opi04515
]
101534411 (ITGAE)
04090 CD molecules [BR:
opi04090
]
101534411 (ITGAE)
Cell adhesion molecules [BR:
opi04515
]
Integrins
Integrin alpha subunits
101534411 (ITGAE)
CD molecules [BR:
opi04090
]
Proteins
101534411 (ITGAE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
VWA_2
FG-GAP_3
Integrin_alpha
Integrin_A_Ig_1
DUF3042
Motif
Other DBs
NCBI-GeneID:
101534411
NCBI-ProteinID:
XP_012784898
LinkDB
All DBs
Position
19:14515696..14573650
Genome browser
AA seq
1453 aa
AA seq
DB search
MWLLLSLLCTAGLAPLAAFNVDVSWGWLTPKGTPFVLSVLLHQDPNTKQTWLLVTSPKTN
RTSWPLHQCSLIHNEIQCHPVEHISMPKGRPQQVTVVRNHHGVLICIQVQSRKSQSLSSE
LTGNCSLLTPTLHPRSQAYFQNLENHLDPEAHVDDGYCHPNEEGSVWKNGSPARHRRALR
QAQEEEEEEEEEAGTEIAIVLDGSGSIDPPDFQRAKDFISNMMRSFSKCFECNFALVQYG
FVIQTEFDLRDSQDIIASLARVQNITQVKNVTKTASAIQHVLDNIFTPSHGSRKKASKVI
VVLTDGETFQDPLNLNDVINSPQMQGIERFAIGVGTAFDKAKTELELKLIASEPDETHAF
KVTNYSALDGLLSRLQQSIIHTEGAAGEALHFQLAQIGFSAQILDEEQVLLGAVGAFNWS
GGALIYNMRSRQGRFLNQTTVDPEDAQYSYLGYSMAVLHKACGRIYLSGAPRHRQRGAVF
ELRKDAFTQVLEGEQMGSYFGSELCPVDIDMDGTTDLLLVAAPFYHVRTEEGRVYVYRLG
EQDGSFSLTHTLSGYPGPTDARFGFAMAAVGDLNQDELTDVAIGAPLEGIGTDRTASFGS
VYIYNGQRDGLSASPSQCIKPSTIAQQLHYFGMSVAGGLDFNSDGLVDVTVGTLGQAVVL
RSRPVTRLNASMTFTPSALPIGFNGSVRVDLCFESSAKRGKMLSRLGGMTLNFLLDVDML
QPRKRLQCSGMRACSGHIEWNAAGSSPCKTLMLAPANKQLCEDDCFSNITVNVSYHLQTH
GRQGGQLHPILDHYTEPFAIFQLPYEKDCKNKLFCVAELGVASTISEQELVVGLTRELTM
NISLSNTGEDSFMTSMTLSYPRNLHFKRMQKPPSPDIQCDDPKPVASVLILKCRVGHPIL
RRSSTNISVTWQLEENAFPNRTADITVTLSNSNEQRSSARSSHTLQFKHAFVVVLPKPSV
TYVNTSRGLSEHKDFLFNIHGENPFGAEYQLQICVPVTLQGLRIVTLKTLNKTQVSASKL
KLQHNEELVFLKEVRPVVGRAFRGVVAVPGSEQQGREAQFLGDDDFRQDFLKGFLVGPID
QVGAFDGNDLQGHRRVVIPENLKDFPKHAFPDLLTAFQLAPQDAVPWSPLTSRSESAAGL
PESVRLNRADLRLARARRTILLSRPPGAASSGELETTAASPKREALVPSSSASWLSMLMS
GLGKPGRRPGNAGSRSWSQGVLHFCGSRARSLRRLGVAAAGRVPRTWEARPPGRLRRRRP
TGLPGAGSRAERGTPTWPEPASRFKRKPRETRAPGPRAGPCVCAARPGRTHPRGAGASGR
VVGLKAWREWLSFQASTDCDVRLQTACVIDRFQHVQKWYSVSCAVSSARENVTVAAEIAL
EPAKQITVIFLREAAQPSLALIIGSSVGGLLLLLLIVVILFKCGFFKRKYQQLNLESMRK
VQLRPESLLPEDG
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcttactctctctgctctgcacagctggcctggctcccctggcagccttcaac
gtggatgtgtcctggggctggctcacacccaagggaacaccttttgtactcagcgtcctt
ctgcaccaagaccccaacaccaagcagacctggctcctggtcaccagcccgaaaaccaac
aggacttcatggcccctgcaccaatgttcgctcattcacaatgaaatccagtgtcaccca
gtggagcacatttccatgcccaaggggaggccccagcaagtgacagtggtccggaaccac
catggcgtcttgatatgcatccaagtgcagtccagaaagtctcaaagcctcagctcagag
ctcacaggcaattgcagcttgctgacccctaccctgcatccccggtcccaggcctacttc
cagaaccttgaaaatcacctggacccagaggcgcatgtggacgatggatattgccatcca
aatgaagaaggcagtgtatggaagaatgggagcccagccaggcatcgccgggcactgcgg
caggcacaggaggaggaggaagaagaagaggaagaagctggcaccgagatcgccatcgtc
ctggatggttcgggaagcattgaccctccagacttccagagagccaaagacttcatctcc
aacatgatgaggagcttctctaagtgtttcgagtgcaacttcgccctggtgcagtatggg
tttgtcatccagaccgagtttgaccttcgggacagccaggatataatagcctcccttgcc
agggtccagaacatcactcaagtgaagaatgtcaccaagactgcctcagccattcagcat
gtcctggacaacatcttcacaccgagccatggctccagaaaaaaggcttccaaggtcatc
gtagtgctcactgatggggagacattccaggaccccctcaacctcaacgatgtcatcaac
tcgccccagatgcagggcattgagcgcttcgccattggggtgggaactgcatttgacaag
gccaagactgaactggagctgaagctgattgcctcggagcccgatgagacgcatgccttc
aaggtaaccaactactcggcgctggacgggctgctgagcagactgcaacagagcatcatc
cacacggaaggagcagccggagaggcccttcatttccagctggcacagattggcttcagc
gcccagatcctggatgaggagcaggtgctgctgggcgcagttggggccttcaactggtcc
gggggagctctgatctacaatatgcgcagccgccagggccgctttctgaaccagacgaca
gtggaccctgaggatgctcagtacagctaccttggttactcgatggccgtgttgcacaag
gcctgtggccgtatctacttgtcgggtgctccgcggcacaggcagcgtggcgcagtgttt
gagctccggaaggatgccttcacgcaggtgctggaaggagagcagatgggatcctatttc
ggctcagagctgtgcccagtggacatcgacatggacgggaccacagacttgctgctggtg
gctgctcctttttaccacgttcgtacagaggaaggcagagtctacgtgtaccgtctgggt
gagcaggatgggtccttctccctgacccatacgctgagcggatatccggggcccactgat
gcccgcttcggctttgctatggcagccgtgggcgatctcaatcaggatgagctcacagat
gtggccatcggggcccccctggagggtattgggaccgacaggacagccagcttcggcagc
gtgtacatctacaatggacagcgggacggcctctctgccagcccctcacagtgtatcaag
ccctccacaatagcccagcaacttcattacttcggcatgtctgtggccggtggcttagat
ttcaatagtgacggccttgtggacgtcactgtgggcacgctgggccaggcggttgtcctc
cgctcacggcccgtgactcgtctgaatgcgtctatgaccttcacccctagcgccctgccc
atcggcttcaatgggagcgtgcgtgtggatttgtgttttgaaagcagcgccaagcggggt
aagatgctgagtcgccttggagggatgaccttgaacttcctactggatgtggacatgctg
caaccaaggaaaaggttgcagtgctcaggcatgagagcctgctcgggtcacatagaatgg
aatgcagcagggtcctctccctgcaagaccctgatgcttgcccccgctaacaaacagctc
tgcgaggatgattgcttttccaacatcaccgtcaatgtcagctaccaccttcagactcac
gggagacaggggggccagctccaccctatcctggaccactacacggagcccttcgccatc
ttccagctgccctacgagaaggactgcaagaacaagctgttctgtgtggccgaactaggg
gtggcctccaccatctctgagcaggagctggtggtgggtctcacaagggagctgaccatg
aacattagtctcagcaacaccggggaagattccttcatgaccagcatgactttgagttac
cccaggaacttacactttaagaggatgcaaaagccgccctctccagacatccagtgcgat
gaccctaagccggtcgcttctgtcttgatcctgaagtgtagggtcggtcaccccatactc
aggaggtcttctacaaacatctcagtaacctggcagctcgaggagaacgcctttccaaac
aggacagcggacatcactgtgaccctgagcaattccaacgaacaaagatcttcggccaga
tctagtcacacgctccagttcaagcacgccttcgtcgtggttcttcccaagccatcagtg
acgtacgtgaacacaagcagggggctttccgagcacaaggacttcctctttaatatccat
ggagaaaatccctttggagcagagtaccagttgcagatttgtgtcccagtcacattacaa
ggtctccggattgtaacactgaagaccctgaacaagactcaggtcagtgcctccaaactc
aaactccagcacaatgaagagctggtcttcctcaaagaagtcaggcctgtcgttggccga
gcctttcgtggagtggtagcggtcccaggctctgagcagcagggccgggaggctcagttc
cttggagatgatgatttcaggcaggatttcctcaaaggttttctggtgggccccattgac
caagtcggggccttcgatggcaacgatcttcagggccaccggcgtgttgtgatccccgaa
aatctgaaagacttccccaaacacgccttccccgatcttctcacagcgttccagcttgcc
ccgcaggatgctgtcccgtggtccccactgacctcacgctcagaatccgccgcgggtctc
cccgagtccgtgaggctcaacagagctgacctgaggctggcccgggctcggaggaccatc
ctgctgagccggcctcccggcgccgcctcctccggggagctggagactacggcggcgtcc
ccgaagagggaggcgctggtgcccagctcgtcggcgtcctggctgtccatgctgatgtcg
gggctgggcaagccggggcggcggccggggaacgcgggcagccggagctggtcgcagggc
gtgctgcacttctgcgggagccgagcccgcagcctcaggcgtctcggggtggcggcggcg
ggcagggtcccccggacctgggaggctcggccgccaggacgcctccgccgccgccggccg
accgggctgccgggagccggctcccgggcggagcgagggacgccgacatggccggaaccc
gccagccggttcaaacgcaaacctcgcgagactcgggcgccgggtcccagggccgggcca
tgcgtctgcgcagcgcgccctgggcgcacgcacccacgcggggccggagcgtcagggcgg
gtcgttgggctcaaggcttggcgcgaatggctgtcgtttcaggcctccactgactgcgat
gtgcgtcttcagacagcttgtgtgatcgatcggtttcagcacgtgcaaaagtggtattcc
gtgagctgcgccgtctcctcggcccgagaaaatgtgaccgtggctgcagagatcgccctg
gagccggcgaagcagatcacagtcatcttcctgcgggaagcggcccagccctccttggcg
ctcatcatcgggagcagcgtgggcggcctgctgctcttgctgctcatcgtggtcatcctc
ttcaagtgtggctttttcaaaaggaaataccagcagctgaacctggagagcatgaggaag
gtccagctgaggcctgagagtctgctgcccgaggacggttag
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integrated database retrieval system