Ochotona princeps (American pika): 101534526
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Entry
101534526 CDS
T07609
Symbol
CNGA1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04022
cGMP-PKG signaling pathway
opi04024
cAMP signaling pathway
opi04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
101534526 (CNGA1)
04022 cGMP-PKG signaling pathway
101534526 (CNGA1)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
101534526 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
opi04040
]
101534526 (CNGA1)
Ion channels [BR:
opi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101534526 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Tim54
CDC45
Ion_trans_2
Sec62
GrpE
Hid1
SLC52_ribofla_tr
CLN3
FancD2
DUF2828
Motif
Other DBs
NCBI-GeneID:
101534526
NCBI-ProteinID:
XP_004579175
LinkDB
All DBs
Position
2A:complement(29832406..29851464)
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AA seq
689 aa
AA seq
DB search
MKTSIIKTRHSFVNIPNVIVPDIEKEIRRMENGACSSFSDDDDSASISEESENESPHERG
TFRTNSHGKEGPSQRKQYLPGTMALFNVNNSSNKDQEQKEKKKKKKGKKTKSDDKNANKK
DSEKKNKKEKEKEKKTKEEKNKDKKEEVKKEVMIIDPSGNTYYNWLFCITLPVMYNWTMI
IARACFDELQSDYLEYWLVCDYLSDIVYLVDMFVRTRTGYLEQGLLVQEERKLIEKYKSN
LQFKLDAVSMIPTDLLYFKLGWNYPEIRLNRLLRISRMFEFFQRTETRTNYPNIFRISNL
VMYIVIIIHWNACVYYSISKAIGFGNDAWVYPDVNDPEFGRLARKYVYSLYWSTLTLTTI
GETPPPVLDSEYVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQAKVDAVKQYMHF
RNVSKDMEKRVIKWFDYLWTNKKTVDEKEVLKYLPDKLRAEIAINVHLDTLKKVRIFADC
EAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSY
FGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGKQIL
MKDGLLDLNIANAGSDPKDLEEKVAQMEGSVDLMQTRFARILAEYESMQRKLKQRLTKVE
SFLKPLIDTEFSSLERAEIESGPTDSTQD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaagtattatcaagacacggcactcctttgtaaacattcccaatgtgattgtt
ccagatattgaaaaggaaataaggaggatggaaaatggagcatgcagctccttttctgat
gacgatgacagtgcctctatatctgaagagtcggaaaatgaaagtccccacgaaaggggt
acttttagaaccaattcacacgggaaggaaggaccctcacagaggaagcagtacttgcct
ggcaccatggcacttttcaacgttaacaacagcagcaataaggatcaagaacaaaaagag
aagaagaaaaagaagaaaggaaagaaaaccaaatcagatgataaaaatgcaaacaaaaag
gattcagaaaagaagaataagaaggaaaaggaaaaagagaagaaaaccaaagaggagaaa
aacaaagataagaaagaagaggtaaagaaagaagtcatgattattgatccctcgggaaac
acgtattacaactggctgttttgcatcaccttacctgtgatgtacaactggactatgatt
attgcaagagcatgttttgatgaacttcaatctgattacctagaatattggctcgtttgt
gactacttatcagatatagtctatcttgtcgacatgtttgtacgaacgaggacaggctac
ctagaacaaggactattggtgcaggaagaacgcaaactcatagaaaaatacaaatcaaat
ttgcaatttaaacttgatgctgtgtcaatgataccaaccgatctgctgtattttaagttg
gggtggaactatccagaaatcagactaaatcggctcttaaggatctctcgtatgtttgag
ttcttccagagaacagaaacaaggaccaattacccaaacatcttcaggatctctaacctt
gtcatgtatattgtcatcattattcactggaatgcatgtgtgtactactctatttcaaaa
gctattggatttggaaatgatgcatgggtctaccctgatgttaatgatcccgaatttggt
cgtttggctagaaagtatgtctacagtctttactggtctacactaactttgactaccatt
ggggagacaccaccccctgttctggattctgagtatgtctttgtggtggttgatttctta
attggagtgttaatttttgctaccatcgttggtaatatagggtctatgatttccaacatg
aatgcagctagggcagaatttcaagcaaaagttgatgctgtcaagcaatacatgcatttc
cgaaatgtaagcaaagacatggaaaagagagtaattaagtggtttgactacctatggacc
aacaaaaaaaccgttgatgagaaagaagtcttgaagtatctacctgataaactaagagca
gaaatcgccatcaatgttcacctcgacacgttaaaaaaggtgcgtatttttgctgactgt
gaagctggtctattggtggagttggtcttgaaattacaaccccaagtctacagccctgga
gattatatttgcaagaaaggggatattggacgagaaatgtacatcatcaaagaaggcaaa
ctcgctgtggtggcagatgatggaatcactcagtttgtggtgctgagtgatggcagctac
tttggtgagatcagcattcttaacattaaaggcagcaaggctggcaatcgaagaacagcc
aatattaaaagcatcggctactcagacctgttttgcctctcaaaagatgacctcatggag
gctctaaccgagtacccagatgccaaaactatgctggaagagaaagggaagcaaattcta
atgaaagatggtctgcttgatctgaatattgccaatgctggtagtgatcccaaagatctc
gaagaaaaagtcgctcaaatggagggctcggtagatcttatgcagacaaggtttgctcgg
atcctggctgagtatgaatctatgcagcggaaactgaagcaaaggttgacgaaagtggag
agctttctgaaacctcttattgacacagaattttcatctcttgagagagctgaaatagaa
agtggacctactgactccacacaggattga
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