Ochotona princeps (American pika): 101534558
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Entry
101534558 CDS
T07609
Symbol
HCN3
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
101534558 (HCN3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
opi04040
]
101534558 (HCN3)
Ion channels [BR:
opi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
101534558 (HCN3)
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Microp_apicomplexa_15
Motif
Other DBs
NCBI-GeneID:
101534558
NCBI-ProteinID:
XP_004589061
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Position
13:114761218..114771367
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AA seq
780 aa
AA seq
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MEAEQRPAAGAGEGATPGLDVAPSAASAPSAAASGPIPGAAPEPKRRQLGTLLQPTVNKF
SLRVFGSHKAVEIEQERVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIILPVGITFFKE
ENSPPWIVFNVLSDTFFLLDLVLNFRTGIVVEEGAEILLAPRAIRTRYLRTWFLVDLISS
IPVDYIFLVVELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHM
TYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVYINRMVNHSWGRQYSH
ALFKAMSHMLCIGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQY
QEKYKQVEQYMSFHKLPADTRQRIHEYYEHRYQGKMFDEESILGELSEPLREEIINYTCR
GLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLARGA
RDTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAFETVA
MDRLRRIGKKNSILQRKRSEPSPGSSGGLMEQHLVQHDRDMARGVRGLAPGTGAQLSGKP
VLWEPLVHAPLQAAAVTSNVAIALTHQRGPLPLSPDSPAVFLARSARRSAGSPASPLVPV
RAGPLLVRGPWASTSRLPAPPSRTLHASLSRAGRSQVSLLGPPPGGGGRRLGPRGRPLSA
SQPSLPQRATGDGSPGRKGSGSDRLPPSGLLAKTPGTAQSPRPPLPESATPRGPQLSANM
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagagcagcggccggctgcgggggccggcgaaggggcgacccctgggctggac
gtggcgccgtccgctgcttcggcgccttcggccgcggcctcaggtccgatccccggggct
gcgcccgagcctaagaggaggcagctcgggacgctgctccagcccacggtcaacaagttc
tctctgcgagtgttcggcagccacaaagccgtggaaatcgagcaggagcgggtgaagtca
gccggggcctggatcatccacccctacagcgatttccggttttactgggatctgatcatg
ttgctgctgatggtgggcaatctcatcatcctgcccgtgggcatcaccttcttcaaggag
gagaactccccaccctggattgtcttcaacgtcctctcggatactttcttcttgctggat
ctggtgctcaacttccgcacaggcattgtggtggaggagggagcagagatcctgctggcc
ccgcgggccatccgtacacgctacctgcgcacctggttcctggttgacctcatctcctcc
atccctgtggattacatcttcctcgtggtggaactggagccccggctggacgccgaggtc
tacaaaacagcccgggccctgcgcattgtccgcttcaccaagatcctcagcctgctgcgg
ctgctccgcctctcccgcctcatccgctacattcaccagtgggaggagatctttcacatg
acctatgacctggccagcgctgtggttcgcatcttcaacctcatcgggatgatgctgctg
ctgtgccactgggatggctgtctgcagttcctggtccccatgctgcaggacttccctccc
gactgctgggtgtacatcaaccgcatggtgaaccactcctggggccgccagtactcccac
gccctgttcaaggccatgagccacatgctgtgcatcggctacgggcagcaagcacctgtg
ggcatgcccgacgtctggctcaccatgctcagcatgattgtgggtgccacatgctatgcc
atgttcatcgggcatgccactgccctcatccagtccctggattcttcccggcgccagtac
caggagaagtacaagcaggtggagcagtacatgtcattccataagctgccggctgacacg
cggcagcgcatccacgagtactatgagcaccggtaccagggcaagatgtttgatgaggag
agcatcttgggcgagctgagtgagccgttgcgggaggagatcatcaattatacctgccgg
ggcctggtggcccacatgccgctgttcgcccacgctgaccccagcttcgtcaccgcggtg
ctcaccaagctgcgctttgaggtcttccagccgggggacctcgtggtgcgtgagggctcc
gtgggcaggaagatgtacttcatccagcatgggctgctcagcgtgttggcacgcggtgcc
cgcgacacccgcctcactgatggatcctactttggggagatctgcctcctgactcggggc
cggcgcacagccagtgtgcgggctgacacctactgccgcctctactctctcagtgtggac
cacttcaacgctgtcctcgaggagttccccatgatgcgccgggcctttgagaccgtggcc
atggatcgactgcgtcgtattggcaagaagaattccatcctgcagcggaagcgctcggag
ccgagcccgggcagcagtggtggcctcatggagcagcacttggtgcaacacgacagggac
atggctcgaggggtccggggcctggccccaggcacaggagctcagctgagtggaaagcca
gtgctgtgggagcccctggtgcacgcacccctgcaggcagcagctgtgacctccaacgtg
gccattgccctgactcaccagagaggccctctgcctctctcccctgactccccagctgtc
ttccttgctcgctctgctcggcgctcagcgggttcccctgcctccccgctggtgcctgtc
cgagctggtcctctgctggtccgaggaccctgggcatccacctctcgcctgcctgcccct
ccttcccgaaccctccatgccagcctgtcccgggctggccgctcccaggtgtctttgctg
ggccctcccccagggggagggggacggcggctgggacctcggggccgccccctctcggcc
tcccagccttcgctgcctcagcgggcaacaggtgatggctctcctgggcgcaagggctca
ggaagtgaccgcctacccccctcagggctcctggctaagactccagggacagctcagtcc
cctaggccgccactgccagagtcagccactccccggggcccccagctctctgccaacatg
tga
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