Ochotona princeps (American pika): 101534601
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Entry
101534601 CDS
T07609
Symbol
BTRC
Name
(RefSeq) F-box/WD repeat-containing protein 1A
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04114
Oocyte meiosis
opi04120
Ubiquitin mediated proteolysis
opi04218
Cellular senescence
opi04310
Wnt signaling pathway
opi04340
Hedgehog signaling pathway
opi04390
Hippo signaling pathway
opi04710
Circadian rhythm
opi05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101534601 (BTRC)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101534601 (BTRC)
04340 Hedgehog signaling pathway
101534601 (BTRC)
04390 Hippo signaling pathway
101534601 (BTRC)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
101534601 (BTRC)
04218 Cellular senescence
101534601 (BTRC)
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
101534601 (BTRC)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
101534601 (BTRC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101534601 (BTRC)
03036 Chromosome and associated proteins [BR:
opi03036
]
101534601 (BTRC)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101534601 (BTRC)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
101534601 (BTRC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-TrCP_D
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
F-box-like
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
F-box
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_VPS8
Beta-prop_Nup120_160
WD40_like
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_WDR11_2nd
NBCH_WD40
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
F-box_5
Beta-prop_HPS5
WD40_2
DUF1513
DUF4508
Motif
Other DBs
NCBI-GeneID:
101534601
NCBI-ProteinID:
XP_004580296
LinkDB
All DBs
Position
18:complement(23826681..24002511)
Genome browser
AA seq
565 aa
AA seq
DB search
MDPAEAVLQEKALKFMCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQTYNSCARL
CLNQETVCLTSTAMKTENCVAKTKLANGTSSMIVPKQRKLSASYEKEKELCVKYFEQWSE
SDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDFITALPARGLDHIAENILSYLDAKSLC
AAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPPDGNAPPNS
FYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIK
IWDKSTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV
LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDR
TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE
ELVRCIRFDNKRIVSGAYDGSNSHLFLFAFIQEHSGRVFRLQFDEFQIVSSSHDDTILIW
DFLNDPAAQAEPPRSPSRTYTYISR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggacccggccgaggcggtactgcaggagaaagcgctcaagtttatgtgctctatgccc
aggtctctgtggctgggctgctccagcctggcggacagcatgccttcgctgcgatgcctg
tataacccagggactggcgcactcacagctttccagacttacaatagctgtgccagactc
tgcttgaaccaagaaacagtatgtctcacaagcaccgctatgaagactgaaaattgtgtg
gccaagacaaaacttgccaatggcacttccagtatgattgtacccaagcagcggaaactc
tcagcaagctatgagaaggaaaaggaactttgtgtaaagtattttgagcagtggtcagag
tccgatcaagtggaatttgtggaacatcttatatcccaaatgtgtcactaccaacatggg
cacataaactcgtatcttaaacctatgttgcaaagagattttataactgctttaccagct
cggggtttggatcatattgctgagaatattctgtcatacctggatgccaaatcattatgt
gctgctgaacttgtgtgcaaggagtggtaccgagtgacatctgatggcatgttgtggaag
aaactcatcgagagaatggtccggacagattcgctgtggagaggcctggcagaacgaaga
ggctggggacagtatttattcaaaaacaagcctcctgatggaaatgcacctcctaactct
ttttacagagcactttatcctaaaattatacaagacattgagacaatagaatccaattgg
agatgtggaagacatagtttacagagaattcactgccggagtgaaaccagcaaaggagtt
tactgtttacagtatgatgatcagaaaatagtaagcggccttcgagacaacacaatcaag
atatgggataaaagcacactggaatgcaaacgaattctcacgggccacacgggttctgtc
ctgtgtctccagtatgacgagagggtgatcataactgggtcatcagattccacagtcaga
gtgtgggatgtgaatacaggtgagatgctcaacacactgattcaccattgtgaagccgtg
ctgcacttgcgtttcaataacggcatgatggtgacctgctccaaagatcgctccattgct
gtgtgggacatggcgtccccaacggacatcaccctccggagggtgctggttgggcaccga
gctgctgtcaatgttgttgattttgatgacaagtacattgtttctgcatctggggacaga
actataaaggtgtggaacacaagtacctgtgagtttgtgaggactttaaatggacacaag
cgaggcatcgcctgtttgcagtacagagacaggctggtagtgagcggctcatctgacaac
actatcagattgtgggatatagaatgtggtgcgtgtttacgagtgttagaaggccacgag
gaactggtgcgctgtattcgctttgataacaagagaatagtcagcggggcctatgatggt
tcaaattctcacctttttttgtttgccttcattcaggagcattctggaagagtcttccga
ctccagtttgatgaattccagattgtcagtagttcacatgatgacacgatcctcatctgg
gacttcctaaatgatccagctgcccaagcggaaccacctcgttccccttctcgaacatac
acctacatctccagataa
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