Ochotona princeps (American pika): 101534603
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Entry
101534603 CDS
T07609
Symbol
ELP1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
opi03016
]
101534603 (ELP1)
Transfer RNA biogenesis [BR:
opi03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
101534603 (ELP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
TPR_GEMI5
TPR_IF140-IFT172
Herpes_UL37_2
Motif
Other DBs
NCBI-GeneID:
101534603
NCBI-ProteinID:
XP_004580980
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Position
1A:20430037..20483324
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AA seq
1333 aa
AA seq
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MRNLKLLQTLEFRDIQAPGKPQCFCLRPELGTVLIGSEHGLVEIDPVTREVKNEIPLVAE
GFLPEDKSGCIVGIQDLLDQESVCVATASGDVILCNLSTHQLECVGSVASGISVMSWSPD
QELVLLATGEQTLIMMTKDFEPILEQQIHQDDFGEGKFITVGWGKKETQFQGSEGRQAAF
QIQMPESALPWDDRRPRVTWRGDGQFFAVSVVCPDTGARKVRVWNREFALQSTSEPVAGL
GPSLAWKPSGSLIASTQDKPNQQDVVFFEKNGLLHGQFTLPFIKDEVKVNELLWNADSSV
LAVWLEDLPREEDSVLRTYIQLWTVGNYHWYLKQSLPFSTSGKSGIVSLMWDPVTPYKLH
VLCQGWHYLCYDWHWTTDRSSGDNASDLANVAVIDGYRLLVTVFQQTVVPPPMYTYRLLL
PHPVNQVSFCALPQKSNDLAVLDASNQISVYKCGDSPSVDPTVKLGAVGGNGFKVCLRTP
HLEKRYKIQFEDNEDQETNPLKLSLLTWIEEDLFLAVCHRQCSPQQSVIHHLLVAPCEEG
AEEGRLSVSASVAVDGVVISMCCSSRTRSVALQLADGRVLQHLWDSPSLAVEPWRNPGGF
PVRFPYPCTQCELAMIGGEECVLGLTDRCRFFINDIEVASNITSFAVYDEFLLLTTHSHT
CQCYCLRDASIKTLQAGLSGSLVSNGEILRKVERGSRIVTVVPQDTKLILQMPRGNLEVV
HHRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIHDHNPEVFLQNVETFIRQIDCVNH
INLFFTELKEEDVTKTMYPPPVPSSGQLSRGLGGKKLDLICDALRAAMESINPHKYCLPI
LTSHVKKTTPELETVLQKVHELQADAPSGPDAVSAEEALKYLLLLVDVNELYDQSLGTYD
FDLVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEYFP
ECLNLIKDKNLYNEALKLYPPTSQQYKDISIAYGEHLMREQQCEPAGLVFARCGAHEKAL
SAFLTCGSWQQALCMAGQLNMTEDQLAGLSRTLAGKLVEQRKHSDAALVLEQYAQDYEEA
VLLLLEGGAWEEALRLVYKYNRLDIIETNIKPSILEAQKNYMVFLDSQTAVFSRHKERLL
VVRELKAQAQQTNLDEEMPHGQEGDFFSETSSVVTSSEMSGKYSHSNSRISARSSKNRRK
AERKKHSLKAGSPLEDVALLEALSEVVQSIDKLKDEVHCILKVLFLFEFDEQGTELQKTF
ESTLQLVEKSLPEIWTLPCQQNSAAPILGPNSTVNSIMASYQQQKTFVPVLDAEFLMPPR
INRKTQWKLSLLE
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaatctaaagttacttcagaccctggagttcagggatattcaagctccagggaaa
cctcagtgcttctgtctgcgacctgaactggggacagtgctgattgggtcagaacatggg
ctggtagagatagaccctgtcacaagagaggtgaaaaatgaaattccgttggtggcagaa
ggctttctcccggaggataaaagtggctgtatcgttgggattcaggacctgctggatcag
gagtcggtgtgtgtggccaccgcctctggggacgtcattctgtgcaatctcagcacacac
cagctggaatgtgttgggagtgttgccagtggcatctctgtcatgagctggagtcctgac
caagagctggtgctgcttgccacaggtgagcagaccctgattatgatgacaaaagacttt
gagccaatcctggagcagcagatccaccaggatgattttggtgaaggcaagtttatcact
gttggatggggcaagaaggagactcagttccaaggatctgaaggcaggcaagcagccttt
cagatacaaatgcctgagtcagctttgccctgggatgaccgtagaccacgtgttacctgg
cgtggggatggacagttttttgctgtgagtgttgtttgcccagacacaggggcccggaag
gttcgagtgtggaaccgagagtttgccttgcagtccaccagtgagcccgtggcaggacta
ggaccatccctggcttggaaaccctcaggcagtttgatcgcatctacacaggataaacca
aaccaacaggatgttgtgttttttgagaagaatggacttcttcatggacagttcacactt
cctttcatcaaagatgaagttaaggtaaatgagttgctctggaatgcagattcctctgtg
cttgctgtttggctggaagaccttcccagggaagaagattctgtcctgcggacctacatt
caactctggaccgttggaaactatcactggtacctcaagcaaagtctgcccttcagcacc
agcgggaaaagcgggattgtctctctgatgtgggacccagtgaccccatacaagctgcat
gtcctctgtcagggctggcattacctctgctatgactggcactggacgactgaccggagt
tcaggagataacgcgagtgacttggcaaatgtggccgtcattgatggatacaggctgttg
gtgacagtctttcagcagactgtggttccacctcccatgtacacataccgactgttgctc
ccacatcctgtgaatcaagtttcgttctgtgcactgccccaaaagagtaatgacctcgct
gtcctggatgccagtaaccagatttctgtatataaatgtggtgatagtccaagtgtggac
cccacagtgaaactgggagctgtgggtggaaatggatttaaagtctgccttagaacacct
catctggaaaaaagatacaaaattcagtttgaggataatgaagatcaggaaacaaaccca
ctgaagctcagccttctcacctggattgaagaagaccttttcctggccgtctgccaccgc
cagtgcagcccgcagcagtctgtcatccaccatttgcttgtggccccttgtgaggagggc
gcagaggaaggacggctcagtgtcagtgcgtctgttgcggtggacggggtcgtgatcagc
atgtgttgcagttccaggaccagatcagtagcactgcagctggctgatggccgggtactt
cagcacctttgggattcaccttctcttgctgttgagccatggaggaaccctggtggattt
cctgttcgatttccttatccatgcacacagtgtgaactggccatgattggaggggaggaa
tgtgtgcttggtctgactgacaggtgtcgctttttcatcaatgacattgaggttgcgtca
aacatcacctcctttgcggtttacgatgagtttttgttgttgacaactcattcccacacc
tgccagtgttattgcctgagggatgcctcaattaaaacattacaggcgggtctaagtggc
agccttgtatctaatggagagattctgcggaaggtggaaagaggttcacgaattgtcacc
gttgtgccccaggacacaaagctcatattacagatgccaaggggaaacttagaagttgtt
catcatcgagccctggttctagctcagattcgcaagtggttggacaaacttatgtttaaa
gaagcatttgaatgtatgagaaaactaagaattaatctcaatctgattcatgatcataat
cctgaggtatttcttcaaaatgtggaaactttcataagacagatagattgtgtcaatcat
atcaatttgtttttcacagaattgaaggaggaagacgtcaccaagaccatgtatcctccg
ccagttcccagcagtggccagctgtccagaggtcttggcgggaaaaagcttgaccttatc
tgcgatgccctgagggcagctatggagagcataaatcctcacaagtactgcctgccaata
ctcacatcccatgtgaagaaaaccactccagagttggagaccgtgctacagaaggtacac
gagctccaagcagatgctccatctggccctgatgctgtgagtgctgaagaggccctgaag
tatctgctgcttctggtggatgttaatgaactatatgatcagtctctggggacctatgac
ttcgacctggtcctcatggtggctgagaagtcccagaaggatccaaaagaatatcttcca
tttcttaatacacttaaaaaaatggaaactaattatcagcggttcactatagacaaatac
ttgaaacgatatgaaaaagccattggccacctcagcaaatgtggtcctgagtacttccca
gaatgcttgaacttgatcaaagataaaaatttgtataacgaggctctgaagttatatcca
ccaacctcacaacagtacaaggatatcagcattgcttacggagaacacctgatgcgggaa
cagcagtgtgaaccagcgggactggtgtttgctcgctgcggggcccatgagaaggccctc
tcagccttcctgacttgcggcagctggcagcaggccctctgcatggccggccagcttaac
atgaccgaagatcagctggctggcctcagcagaactctggcaggaaagctagttgagcag
aggaagcacagtgatgcagcccttgttctggaacagtacgcccaggattatgaagaagcg
gtgctcttgctgttagaaggaggcgcctgggaagaagcactgaggctggtatacaaatac
aacaggttggatattatagaaaccaacataaagccttccattttagaagcccagaaaaat
tacatggtatttctggactctcagacggctgtgttcagccgccataaggaacgtttattg
gtggtccgagagctcaaggcacaagcacagcagacgaatctggatgaggagatgccccat
ggtcaagagggagacttcttctctgaaaccagcagtgttgtgaccagcagtgagatgagt
ggcaaatattcccatagcaactcaaggatatctgcgcgatcatccaagaaccgacgcaaa
gcagagcggaagaagcacagcctcaaagcagggagtccgctggaggatgtggccctgttg
gaggccctgagtgaagtggtccagagcatcgacaagttaaaagatgaagtacactgtatt
ttgaaggtactctttctcttcgagtttgatgagcaaggaacggagttacaaaagaccttt
gaaagcactctgcagctggtggaaaaatcgcttccagaaatctggactctcccctgccag
cagaattcagctgcacctattctaggtcccaattctactgtaaatagcatcatggcctct
tatcaacaacagaagacttttgttcctgttcttgatgctgaatttttaatgccaccacgg
atcaacagaaaaacccagtggaaactaagcctgctagagtga
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integrated database retrieval system
