Ochotona princeps (American pika): 101534646
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Entry
101534646 CDS
T07609
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
101534646 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101534646 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
opi03310
]
101534646 (RORB)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
101534646 (RORB)
Nuclear receptors [BR:
opi03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
101534646 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
101534646
NCBI-ProteinID:
XP_004591829
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All DBs
Position
1B:2968664..3114101
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AA seq
470 aa
AA seq
DB search
MCENQLKPKADASAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQ
RNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQ
QQSGEAEALARVYSSSISNGLGSLTSETSGTYANGHVIDLPKSEGYYTIDSGQPSPDQSG
LDMTGIKQIKQEPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQY
TMEELHQLAWQTHSYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQN
DQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNL
CSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKL
IAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagaaccagctcaaacctaaagctgacgcctctgcacaaattgaagtgatacca
tgcaaaatttgtggcgataagtcctccggaatccactacggagtcatcacgtgtgaaggt
tgcaagggattcttcaggagaagccagcagaataatgcctcgtactcctgcccaaggcag
agaaactgcttaattgacagaaccaacaggaaccgttgccaacactgccggctgcagaag
tgtcttgccctaggaatgtcaagagatgcggtgaagttcgggaggatgtccaagaagcaa
cgggacagcctgtacgcggaggtgcagaaacaccagcagcggctgcaggagcagcggcag
cagcagagcggggaggccgaggccctggccagggtatacagcagcagcatcagcaacggc
ttgggcagcctcaccagtgagaccagcggcacctatgccaacgggcacgtcatcgacctg
cccaagtccgaggggtactacaccatcgactcgggccagccgtcccctgatcagtcagga
cttgacatgactggaatcaaacagataaagcaagaacctatttatgacctcacttccgtc
cccaacttgtttacctatagctctttcaacaatggacagttagcaccagggataaccatg
actgaaattgatcgaattgcacagaacatcatcaagtcccacctggagacatgtcagtac
accatggaagagctgcaccagctggcgtggcagactcacagctatgaagaaattaaagcg
tatcaaagcaagtccagggaagccctgtggcagcaatgcgccatccagatcactcatgcc
atccagtacgtggtagagtttgcaaagcggataacaggcttcatggagctctgtcaaaac
gatcaaattctgcttctgaagtcaggttgcttggaagtggttttggtgagaatgtgtcgt
gccttcaacccactaaacaacactgttctgtttgaaggaaaatatggaggaatgcagatg
ttcaaggccttaggttccgatgacctagtgaatgaagcatttgactttgcaaagaatctg
tgctccttgcagctgactgaggaggaaattgctttgttttcatctgctgttctaatatct
ccagaccgagcctggctgatagaaccacggaaggtccagaagcttcaggaaaaaatttat
tttgcacttcagcatgtgattcaaaagaatcacttggacgatgaaacgctggcaaagtta
atagccaagataccaaccatcactgcagtgtgcaacttgcacggggagaagcttcaggta
tttaagcaatctcatccagacatagtgaatacactgtttcctccgttgtacaaggagctc
tttaatcctgactgtgccaccgtctgcaaatga
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