Ochotona princeps (American pika): 101534732
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Entry
101534732 CDS
T07609
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opi03041
]
101534732 (TFIP11)
Spliceosome [BR:
opi03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
101534732 (TFIP11)
Other components
Complex C specific factors
101534732 (TFIP11)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
101534732
NCBI-ProteinID:
XP_004592001
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Position
21:complement(14629602..14639667)
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AA seq
838 aa
AA seq
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MSLSHLYRDGEGRVEDDDDEREDFEITDWDLQNEFNPNRQRHWQTKEEATYGVWAERDSD
DERPSFGGKRPRDYSAPVSFISAGLKKGAAEEAEADDSDDDEKPVKQEDFPPKDLGPKKL
KTGGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPI
EAKQRKGKGAVGAYGSERTTQSLQDFPVVDSEEEAEEEFQKELSQWRKDPSGSKKKPKYS
YKTVEELKAKGRISKKLTAPQKELSQVKVIDMTGREQKVYYSYSQISHKHSIPDEGLPLP
SQQVPQSGREAKAPGFALPELEHNLQLLIELAEQEIIQNDRQLQYERDMVVNLSHELEKM
SEVLEHEQRVIGNLSKVLELVEQCERRLQPNCSSPLTLDECARVFQTLQDKYHEEYRMSD
RVDLAVAIVYPLMKDYFKEWDPLKDCTYGTEIISKWKSLLENDQLLSHGGQDLSTDAFHR
LIWEVWMPFVRNIVNQWQPRNCDPMVDFLDSWVNIIPVWILDHILDLLIFPKLQKEVENW
NPLTDTVPIHSWIHPWLPLMQARLEPLYSPIRSKLASALQKWHPSDSSAKLILQPWKDVF
TPGSWEAFMVKNIVPKLGMCLGELVINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFF
PKWLQVLCSWLGNSPNYEEITKWYLGWKSMFSDQVLAHPSVKDKFNEALDMMNRAVSSNV
GAYMQPGARENIAYLTHTERRKDFQYEAMQERREAENMAQRGIGAAASSVPTNFKDLIET
KADEHNIVFMPVIGKRHEGKQVYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctcccacctgtaccgggacggagaaggccgcgtggaggatgacgacgatgag
cgggaggactttgaaatcaccgactgggatctccagaatgagttcaaccccaaccggcag
cgccattggcagaccaaggaggaggccacgtacggggtgtgggccgagcgcgactcggac
gacgagaggcccagcttcggaggcaaacgaccccgcgactactcggcgccggtcagcttc
atcagtgcagggctcaagaaaggggcggccgaggaggcggaggccgacgattccgatgac
gacgagaagcccgtgaaacaggaggactttcccccgaaggatttgggacccaagaagtta
aaaacgggtgggaactttaagccgagccagaaaggtttcgcaggaggcaccaaatctttc
atggactttggcagctgggaaagacacacgaaagggatcgggcagaagctgctccagaag
atgggctacgtacctggaagaggcctcggaaagaacgcccaaggcatcataaaccccatt
gaagccaagcagagaaagggaaagggagccgtgggggcctacggctctgagcggaccacg
cagtccctgcaggacttccccgtggtggactcggaagaggaagccgaggaggagtttcag
aaggagctgagccaatggaggaaagaccccagcggaagcaagaagaagcccaaatactct
tacaagacagtggaggagttgaaggccaagggcaggattagcaagaaactcacggctccc
cagaaggagctgtctcaggtcaaggtcatcgacatgacaggccgggagcagaaggtgtat
tacagctacagccagatcagccacaagcacagcatcccagacgaggggctgcccctgccg
tcccagcaggtgccgcagtccggcagggaggccaaggccccgggcttcgcgctgcccgag
ctggagcacaacctgcagctgctgatcgaactcgccgagcaggagatcatccagaacgac
cggcagctgcagtacgagcgcgacatggtggtgaacctgtcccacgagctggagaagatg
tccgaggtgctggagcacgagcagcgtgtcatcggcaacctcagcaaggtgctggagctg
gtggagcagtgcgagcggcgcctgcagcccaactgcagcagccccctcaccctggacgag
tgcgcccgcgtcttccagaccctgcaggacaagtaccacgaggagtaccgcatgtccgac
cgtgtggacctcgccgtggccatcgtctacccgctcatgaaggactacttcaaagagtgg
gaccccctcaaagactgcacgtatggcactgagatcatctccaagtggaaaagcctcctg
gagaacgaccagctcctatcacacggcgggcaggacctctccacagacgccttccacagg
ctgatttgggaggtctggatgccttttgttcgaaacattgtcaaccagtggcagccacgg
aactgtgacccgatggtggacttcctggacagctgggtgaacatcatccccgtgtggatc
ctggatcacatactggatctgctcatcttccccaagctgcagaaggaggtggaaaactgg
aaccccctgacagacactgtccccatccactcctggatccacccgtggctgccgctcatg
caggcccggctggagccgctctattccccgatccgcagcaagctggccagcgccctgcag
aagtggcaccccagcgactcttcagccaagctcatcctccagccctggaaggatgtcttc
acccctggctcctgggaagcattcatggtcaagaacatcgtgcccaagctcggaatgtgt
ctcggcgagctggtcattaacccccaccagcagcacatggacgccttctactgggtcatc
gactgggagggcatgatctccgtgtccagcctcgtggggctcctggagaagcatttcttc
cccaagtggctgcaggtactgtgctcctggctcggtaacagcccaaactatgaggagatc
accaagtggtacctgggttggaaatccatgttctcagaccaagtgctggcacatccgtcc
gtcaaggacaaatttaacgaagcccttgacatgatgaatagggccgtgtcctccaacgtc
ggtgcctacatgcagcccggtgcgcgtgagaacatcgcctacctcacccacacggagcgg
aggaaggacttccagtacgaggccatgcaggagcggcgcgaggccgagaacatggcccag
aggggcatcggcgcggcggccagctctgttcccacgaacttcaaggacctcatcgagacc
aaggccgatgagcacaacattgtcttcatgcccgtcatcggcaagcggcacgagggcaag
caggtgtataccttcggccgcatcgtcatctacatcgaccgcggggtggtcttcgtgcag
ggtgagaagacctgggtgcccacctccctgcagagcctcatcgacatggccaagtag
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