Ochotona princeps (American pika): 101534744
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Entry
101534744 CDS
T07609
Symbol
VPS33A
Name
(RefSeq) vacuolar protein sorting-associated protein 33A
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04140
Autophagy - animal
opi04142
Lysosome biogenesis
opi04145
Phagocytosis
opi04148
Efferocytosis
opi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
101534744 (VPS33A)
04142 Lysosome biogenesis
101534744 (VPS33A)
04140 Autophagy - animal
101534744 (VPS33A)
04148 Efferocytosis
101534744 (VPS33A)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101534744 (VPS33A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101534744 (VPS33A)
Membrane trafficking [BR:
opi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101534744 (VPS33A)
Hops complex
101534744 (VPS33A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
RMD9_mid
Pectinesterase
Motif
Other DBs
NCBI-GeneID:
101534744
NCBI-ProteinID:
XP_012785294
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All DBs
Position
21:1523166..1537138
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AA seq
595 aa
AA seq
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MAAHLSYGRVNLNVLREAVRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGSRLPAADVKNIIFFVRPRLELMDIIADNVLSEDRRGPARDFHILFVPRRSLL
CEQRLKDLGVLGSFIHREEYSLDLIPFDGDLLSMESEGAFRECYLDGDQTSLYHAAKGLM
TLQALYGTIPQIFGKGECARQVANMMIRMKREFTGSQSSVFPVFDSLLLLDRSVDLLTPL
ATQLTYEGLIDELYGIQNSYVKLPPEKFAPKKQGDGKELPAEAKKLQLNSAEELYAEIRD
KNFNAVGSVLSKRAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARGSLANHTSIAELI
KDITTSEDFFDKLTVEQEFMSGIDTDKVNSYIEDCIAQKHPLIKVLRLICLQSVCNSGLK
QKVLDYYKREILQTYGYEHMLTLHNLEKAGLLKPQTGGRNNYPTIRKTLRLWMDDVNEQN
PTDISYVYSGYAPLSVRLAQLLSRPGWRSIEEVLRMLPGPHFEERQPLPTGLQKKRQPGE
NRVTLVFFLGGVTFAEIAALRFLSQLEDGGTEYVIATTKLVNGSSWLEALMESPL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacacctgtcttacgggcgagtgaacctgaatgtgctgcgtgaggcagtgcgc
cgcgagttgcgcgagttcctggacaagtgcgcgggaagcaaggcaatagtttgggatgaa
tatctgactggaccttttggcctgatcgcacagtattccctgctgaaggaacatgaagtg
gaaaaaatgttcaccctcaagggaagccgcttgccggcggctgatgtgaagaacattatt
ttctttgtcagaccacggctcgagctgatggacataatcgccgacaatgtgctcagtgag
gaccggcgtggccccgccagagacttccacatcctgttcgtgccccgccgtagcctgctg
tgcgagcagcggctgaaggacctgggcgttctaggctccttcatccaccgggaggagtat
agcctggatctcatcccgtttgacggggacctgctgtccatggagtcggagggggccttc
agagagtgctacctggacggcgaccagacaagcctgtaccacgcggccaaggggctgatg
acgctgcaggccctgtatggaaccatcccccagatcttcgggaaaggcgaatgcgcccgg
caagtggccaacatgatgattcgaatgaagagagaattcacaggaagccagagttcagtg
tttcctgtgtttgatagcctcctgctgctggatcgcagtgtggacttgctgacgcctctt
gccactcagctgacgtacgaaggcctcatcgatgagctctacggcattcagaacagttat
gtgaagttgccccctgagaaatttgctcccaagaaacagggcgacgggaaggagctgccc
gccgaagcgaagaagctgcagctgaactcggccgaggagctctacgcggagatccgagac
aagaacttcaacgccgtgggctctgtgctcagcaagagggccaagatcatctccgcggca
ttcgaggagcgacacaacgccaagaccgtgggcgaaatcaagcagtttgtttcccagctg
ccacatatgcaggcagccaggggctccctggccaaccacacgtccattgccgagctgatc
aaggacatcaccacttctgaagatttctttgataaattaacggtggaacaggagtttatg
tctggaatcgacaccgataaggtgaacagttacatcgaggactgtattgcccagaagcac
ccgctgatcaaggtgttaaggctgatttgcctccagtccgtgtgcaacagtgggctcaaa
cagaaagttctggattattacaaacgagaaattctccagacctacggctacgagcacatg
ctgaccctgcacaacctggagaaggccggcttgctgaaaccgcagaccgggggccggaac
aactacccgaccatccggaaaactctgcgcctctggatggatgacgtcaacgagcagaat
cccacggatatatcctatgtgtacagtggctacgcgcccctcagcgtgcggctggcccag
ctgctctcgcggcccggctggcgcagcattgaggaggtcctccgcatgctcccgggaccc
cactttgaggaacggcagcccctgcccacaggactgcagaagaagcgtcaacctggagag
aaccgagtgacactggtctttttcctcgggggcgtgaccttcgctgagatcgcggccctg
cggttcctctcgcagctggaggacgggggcactgagtacgtcatcgccaccacgaagctt
gtgaatggcagcagctggctcgaggccctcatggagagccctttgtag
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