Ochotona princeps (American pika): 101534934
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Entry
101534934 CDS
T07609
Symbol
HPS1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101534934 (HPS1)
Membrane trafficking [BR:
opi04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
101534934 (HPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_2
Fuz_longin_3
Motif
Other DBs
NCBI-GeneID:
101534934
NCBI-ProteinID:
XP_004580035
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All DBs
Position
18:26435658..26464836
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AA seq
706 aa
AA seq
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MKCVLVATEGAEVLFYWTDKEFEKSLRLKFRQSENEEEELPALEDQLSMLLAPVIISSMT
MLEKLSDTYTCFSTQNGDHLYVLHLFGECLFIAINGDHTESEGDLRRKLCVLKYLFEVHF
GLVTVDSQLIRKELRPPDLEQRVQVWKHFQSLLWTYSRLREQEQCFAVEAVERLIHPQLC
ELCIEALERHCVQAVNSSPERAGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILL
VQDLYPSESTAEDDSDTQVSEQPLRRPQSSQTLPVQQAWRPFPAGMRGNSSVETEDTDSL
SLLEEYFTPAPSPGEQSSGSTVWLEGGTPPTDAPQLAEDTFETLVPPSPTPSGPRRIFLD
ANVKDNYCPLVPHTMYCLPLWPGINMVLLTKSPSTPLALVLYQLLDGFSLLEKKLKEGQE
AGSALRSQPLMGELRQRMDKFVKSRSGQEMQSTWLEFKTKAFSKTEPGSSWELLQACGKV
KRQLCTIYRLSFLNTAPDRGGPQLPQHLQDQAQKLLQEKLSDWKDFLLVKSRRNVTMVSY
LEDFPGLVHFIYIDRTTGHMVAPSLSSSDKTSSELGRGPLAAFVKTKVWALIRLARRYLQ
KGYTTLLFQEGDFYCSYFLWFENDMGYKLQIIEVPVLSDDAVPIGMLGGNYYRKLLRYYS
KSHPTEAVRCYELLALHLSVIPTDLLVQQASQLARRLGESSRVPLP
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcgtcctggtggccactgagggcgccgaggtcctcttctactggacagacaag
gagtttgaaaagagtctccggctgaagttcaggcagtcagagaatgaagaagaagagctc
cccgcgctggaggaccagctcagcatgctgctggcccctgtcatcatctcctccatgacg
atgctagagaagctctcggacacctacacctgcttctcaacgcaaaatggcgaccacctg
tatgtccttcacctgtttggtgaatgcctgttcatcgccatcaacggagaccacacagag
agcgagggcgacctgcggcgcaagctatgcgtgctcaaatacctgttcgaggtacacttc
gggctggtcaccgtggacagccagctcatccggaaggaactgcggcccccggacctggag
cagcgagtgcaggtgtggaagcatttccaaagcctgctgtggacctacagccgcctgcgg
gagcaggagcagtgctttgctgtggaggctgtggagcggctgattcaccctcagctctgt
gagctgtgcattgaggcgctggagcggcactgcgtccaggccgtcaatagcagccccgag
cgggccggtgaggaagccctacatgccttcctgcttgtgcactccaagctgctggccttc
tactccagccacagtgccagctccctgcgcccggccgacctgcttgccctcatcctcctg
gttcaggacctgtaccccagcgagagcacagcggaggatgacagtgacactcaggtctcg
gagcagcccctacggagaccccagagcagccagaccctccccgtgcagcaggcctggcgc
cctttccctgcaggcatgcgcgggaacagttccgtggaaacggaggacacagacagcctt
tccctcctggaggagtacttcacgccggctccatcccccggggaacagagctcagggagc
actgtctggctggaggggggcaccccacccaccgatgctccacagctagctgaagacacc
tttgagaccctggttcctccttctccaacgccctctggccccaggagaatcttcctagat
gccaacgtgaaagacaactactgccccttggtgccccacaccatgtactgcctgcccctg
tggcccggcatcaacatggtgctcctgaccaagagccccagcacacctctggccctggtg
ctgtaccagctgctggatggcttttccctgctggagaagaagctgaaggagggccaggag
gctggcagtgcgctgcggtcccagccgctcatgggagagctgcgtcagagaatggacaag
ttcgtcaagagtcgaagtgggcaggagatgcagagcacctggttggagttcaagaccaag
gccttctccaaaactgagccaggatcatcatgggagctgctccaggcatgcggaaaggtg
aagcggcagctgtgtaccatctaccgcctcagcttcttgaacacagcgccagacaggggc
ggcccccagctgccacagcacctgcaggaccaggcccagaagctcctacaggagaagctg
agcgactggaaggactttctgctggtgaaaagcaggaggaacgtcaccatggtgtcctac
ctggaagacttcccgggcttggtgcacttcatctacatagaccgcaccactgggcacatg
gtggcgccatccctcagcagcagtgacaagacgtcctcagagctgggcagggggcccctg
gctgccttcgtcaaaaccaaggtctgggctctgatccggctggcgcgcaggtacctgcag
aagggctacaccacgctgctgttccaggagggggacttctactgctcctacttcctgtgg
ttcgagaatgacatggggtacaagctgcagataattgaggtgcctgtcctctctgatgat
gcggtccccattggcatgctgggaggcaactactacaggaagctgctgcgctactacagc
aagagccatccaactgaggccgtaaggtgctacgagctgctggccctgcacctgtcagtc
atccccacggacctgctggtgcagcaggccagccagctggcccgacgcctgggggaatcc
tcccgtgtccccctgccctag
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