Ochotona princeps (American pika): 101534959
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Entry
101534959 CDS
T07609
Name
(RefSeq) lipopolysaccharide-binding protein
KO
K05399
lipopolysaccharide-binding protein
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04064
NF-kappa B signaling pathway
opi04620
Toll-like receptor signaling pathway
opi04936
Alcoholic liver disease
opi05152
Tuberculosis
opi05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
101534959
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
101534959
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
101534959
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101534959
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
101534959
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
opi04147
]
101534959
Exosome [BR:
opi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101534959
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LBP_BPI_CETP_C
LBP_BPI_CETP
PHA_gran_rgn
Motif
Other DBs
NCBI-GeneID:
101534959
NCBI-ProteinID:
XP_004586104
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All DBs
Position
4A:24267664..24283002
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AA seq
482 aa
AA seq
DB search
MGDLARLLLRSTLLGLLLTSAPGALGANPGLVARITDKGLEYAAREGLLALQRKLQDIKL
PEFSGDFRIKHIGRGNYEFHSLQINACELLGATLSPVPGHGLSLAISNSYVRVQGAWKVR
KSFLRLKNSFELHVNGITIAVNLLLGSEPSGRATVTTSSCSSHIRDVEVDINGDLGWLLS
LFHNQIENKLRRVLEKEICERIKEAVTSDLQPYLQTLPVTAEIDSFVGIDYSLMEPPRAT
ARTLEVMFKGEIFHLSHHSPVDVLVPAMSLPETRSQMVYFAISDYVFNTASVVYHKLGYA
NFSITDDMIPSDSHIRLTTKSFRAIVPRIAKLYPNMNLELQGSVVSAPVLTLSPENLYMA
PQMEIEAFVVLPSSVRELVFRLGVATNVSATLTFNTSKITGSLKPEKLQVELKESKVGGF
NVELLEALLNYYLLNNLYPKVNEKLAHGLPLPLLRHIQLHDLALQIHQNFLFLGANIQYM
RT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgggagacttggccaggcttctgctgagatccactctgctgggattgctactcacgtct
gccccaggggctctgggtgccaaccctggtctggtggccaggatcacagacaagggcttg
gagtatgcggccagggaggggctgctggctctgcagaggaagctccaggacatcaagctg
cctgagttctccggggacttcaggatcaaacacatcgggcgtgggaactacgagttccac
agtctgcaaatcaacgcgtgcgagctgctcggtgccaccctgagccctgtccccggccac
ggcctgagtcttgccatctccaattcctacgtccgcgtgcagggcgcctggaaagtgcgc
aagtcgttcctgaggctgaaaaactcctttgagctgcatgtcaatggcatcaccattgca
gtcaacctcctgctgggcagcgagccctccgggagggccacagtaaccacctccagctgc
agcagccacatccgcgatgtggaggtggacataaacggggacctggggtggctgctgagt
ctcttccacaaccagatagagaacaagctgcgccgagtgctggagaaggagatttgcgaa
cgtatcaaggaagcagtgacctctgacctccagccttatctccaaacactgccagtcaca
gcagagatcgacagtttcgttggcatcgattacagcttaatggagccccctcgggccaca
gcccggactctggaggtgatgttcaagggggagatttttcatctgagtcaccactcccca
gtggatgtccttgtcccggccatgagcctccccgagacgcgcagccagatggtctacttc
gccatctccgattacgtctttaacacagccagcgtggtttatcacaagttggggtacgcc
aacttctccatcacggatgacatgattccatcagactcccatatccggctgaccaccaag
tccttccgcgccatcgtgccccggatagccaagctctaccccaacatgaacttagagctc
caggggtcagtggtctctgcccctgtcctgaccctcagccctgagaacctgtacatggca
ccccagatggagatcgaggcctttgtggtcctgcccagctctgtcagggagcttgtcttc
cggcttggtgtggccactaacgtgtcagccacactgaccttcaacaccagtaagatcact
gggtccctgaagccagagaagctgcaagtggagctgaaagaatccaaggtcggcggattc
aacgtggagctgttggaagcactcctcaactactaccttctgaacaacctgtatcccaaa
gtcaatgagaagctggcccatggcctccccctcccgctgctgaggcacatccagctccac
gacctggctctccagatccaccagaacttcctgttcttgggtgccaacatccagtacatg
cgaacatga
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