Ochotona princeps (American pika): 101535083
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Entry
101535083 CDS
T07609
Symbol
RFX7
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101535083 (RFX7)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Other basic domains
RF-X
101535083 (RFX7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
WHD_Cdc6
K319L-like_PKD
Motif
Other DBs
NCBI-GeneID:
101535083
NCBI-ProteinID:
XP_004578120
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All DBs
Position
17:complement(68124268..68265443)
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AA seq
1464 aa
AA seq
DB search
MAEEQQQPPPPQPDAHQQLPPGAPNSGVALPALVPGLPGTEASALQHKIKNSICKTVQSK
VDCILQIFEKFGELRKIFYLLVHSPSGQSSQSXADLNDQNAMSSSRTQQMHALSWIRNTL
EEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRGKSKYCY
SGLRKKAFVHMPTLPNLDFHKTGDGLEGTEPSGQLQNIDEEVISSACRLVCEWAQKVLSQ
PFDTVLELARFLVKSHYIGTKSMAALTVMAAAPAGIKGIPQTSAFIPTAESNSFQPQVKT
LPSPIDAKQQLQRKIQKKQQEQKLQSPLPGESSAKKSEGTTANGVTNLPNGNSAILSPQP
IGIVVAAVPSPIPVQRTGQLVTSPSPVSSSDGKVLPLNVQVVTQHMQSVKQTPKTPQNVP
ASPGGDRSARHRYPQILPKPANTSALTIRSPTTVLFTSSPIKTAVVPASHVSSLNVVKMT
TISLTPSNGHTPLKHSASVSSATATTEESRSVPQIKNGSVISLQSPGSRTSSTGGTSAVE
VKMEPEMSSDEHPVQCQENSDGAKIPQATSSALIGQKSSTDGAVQKPSSESVTEIKATKV
CDQRTKCKSRCNEILPGTSTGNNQSTVTLPVATQNLTFTSSSSPSNGDSINKDPKLCTKS
PRKRLSSTLQELQVPPVKKPIVEQLATVVIEGQKPGSVKKDQKVPHSGKIESSTTGAQIP
SKISANVSSPTVENQPLNSTLLFSDSALEQQATPSSSPDIKVKLERSVFLLDNDSKSDGS
FNPNEWQQVSKDSEFISAGCDQQQAISVMTIPEHSDINDLEKSVWELEGMPQDTYSQQLH
SQIQESSLNQMQAQPSDQLPLQSELKEFEPSVTQTNENYFPFDDELTQDSIVEELVLMEQ
QMSMNNSHSYGNCLGMTLQSQSITPGAPMSSHTSSTHFYHPIHSNGTPIHTPTPTPTPTP
TPTPTPTPTSEMIAGSQSLSRESPCSRLAQTTPVDSALGSSRHTPIGTPHSNCSSSVPPS
PVECRNPFAFTPISSSMAYHDASIVSSSPVKPMQRPMATHPDKTKLEWMNNGYSGVGNSS
VSGHGILPSYQELVEDRFRKPHAFAVPGQSYQSQSRHHDTHFGRLTPVSPVQHQGAPVSN
TNKQEGFAVPAPLDNKGTNSSASSNFRCRSVSPAVHRQRNLSGSTLYPVSNIPRSNVTPF
GSPVTPEVNVFTNVQTDTCANSIAQRSQSVPLTVMMQTAFPNALQKQTNSKKITNVLLSK
LDSDNDDAVRGLGMNNLPSNYTARMNLTQILETSTVFPSANPQNMIDSSTSVYEFQTSSY
LTKSDSTDQISFSPRDNQAQSEIGEQQLDFSSTVKDLLSGDSLQTNQQLAGQVASDLTNA
ASDFPSDIRLSSELSGSINDLNTLDPNLLFDPGRQQGQDDEATLEELKNDPLFQQICSES
MNSMTSSGFEWIESKDHPTVEMLG
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaacaacaacagccgccgccaccgcagcctgatgcccatcagcagcttccc
cccggcgcccccaactcgggggtggctctgccagcccttgtgcccgggctgccagggaca
gaggccagcgcgctgcaacacaagatcaagaactccatctgcaaaactgtacaatctaaa
gtggactgcattttgcagatttttgagaaatttggtgagcttagaaagatcttctatctg
ctggttcactccccaagtggtcaaagcagccagagctgagccgatctgaacgatcagaat
gccatgtcatctagtcggacacagcaaatgcatgcgttgtcctggattcggaatacccta
gaggagcatcctgagacttcattgcccaaacaagaagtctatgatgagtacaagagctat
tgtgacaatcttggttaccatccattaagtgctgctgactttggaaagatcatgaaaaac
gtctttccaaacatgaaggcacgtcgtttgggcactagaggcaaatctaaatattgctac
agtggactaagaaaaaaagcttttgttcatatgccaacactgcccaaccttgactttcac
aaaactggagatgggttggaaggaactgagccttctgggcagcttcagaatattgacgaa
gaagttatctcctctgcttgtcgtcttgtatgtgagtgggcccagaaagtgctaagccag
ccatttgatacagtcttggaattagcccgctttcttgtcaaaagtcactatataggcacc
aagtcaatggcagctctaactgtaatggcagcggcaccagcaggaattaaaggaattccc
cagacatctgcatttatacctacagctgaaagtaattcctttcagccgcaggtgaagact
ttgccatctcctattgatgctaaacaacagctgcaacggaaaatccagaagaagcaacaa
gaacagaaattacagtcccctttgccaggagaatcatcagcaaaaaaatcagaaggcact
acagccaatggagtgactaatcttccaaatggaaattctgcaatcctctctcctcaacct
attggtatcgttgtggcagctgtccctagtcccattccggttcagcggactgggcagttg
gtgacttcaccaagtccagtgagttcgtccgatggtaaagttcttcccctcaatgtgcag
gtggtcactcagcacatgcagtctgtgaagcagacaccaaagactcctcagaacgttcca
gccagccctggtggggatcgttctgcccggcaccgttaccctcagatcttacccaaacca
gctaacaccagtgcgctcaccatccgctctccaacgactgtcctctttactagcagtccc
atcaaaaccgccgttgtgcccgcttcccatgtgagttctctaaatgtggtgaaaatgaca
acaatatccctcacacccagcaacggtcatacccctcttaaacattctgcctcagtcagc
agcgctacagcaacaacagaagaatcaaggagtgttccccaaatcaagaatggttctgtt
atctctcttcagtctccaggctctaggaccagcagcactgggggaacgtctgccgtggaa
gtaaaaatggaacctgaaatgtcatcagacgagcaccctgtgcagtgccaagagaactct
gatggggctaaaattccccaggcaacatctagtgccctcataggacagaaaagcagcacg
gatggagcagtgcaaaaaccttccagtgaaagtgtcactgaaataaaagccaccaaggtc
tgtgaccagaggaccaaatgtaaaagtcgctgtaatgaaattctgccaggcacttcaaca
ggcaataatcaaagcactgtcactctcccagttgccacccaaaacttaactttcaccagc
agcagctcaccatctaatggtgactcaataaataaagaccctaaattatgcactaaaagt
ccaaggaaacgactgtcttctacattacaagagttgcaggtgcctcctgtgaagaaacca
attgtggaacagcttgctacagttgtcatagaaggtcagaaaccaggtagtgttaagaaa
gaccaaaaggttccacattcagggaaaatagaaagttccaccacaggtgctcagattcct
agcaagatatcagcaaatgtcagttcacccacagtggaaaatcaacccttgaattctacc
cttcttttcagtgattcagctttggaacagcaggcaacaccctcatcatctccagacatc
aaagtaaaacttgaaaggagtgtctttctgttggacaatgattcaaaatcagatggcagc
tttaatccgaatgagtggcaacaagtctctaaggattctgagtttatatctgctggctgt
gaccaacagcaggctatcagtgttatgacaattcctgagcattctgatatcaacgactta
gagaaatctgtttgggagttagaaggaatgccacaggacacatacagccaacagctgcat
agccagatacaagaatcttctttgaatcaaatgcaagcacagccttcagatcagttacct
ctacagtctgaactgaaggagtttgagccttctgttacccagacaaatgaaaactacttt
ccttttgatgatgaactcacacaagatagtattgtggaagagctggtgcttatggagcag
caaatgtcaatgaataattcacattcttatggtaactgtttggggatgacccttcagagt
cagtccataactccaggagctccaatgtcatctcacacctccagcacccacttctaccat
ccaatccacagcaatggcacaccaatccacacacccacacctaccccaactcctacaccc
accccaaccccaactccaaccccaacgtctgaaatgattgccggatctcaaagtctgtct
cgggagagcccttgttccaggctagcccagacaacacctgtggatagcgctttaggaagt
agccgacacacccccattggcactccacattctaactgcagcagtagcgtccctcccagc
cctgttgaatgcaggaatccatttgcattcaccccaataagctccagtatggcctatcat
gatgccagcattgtctcaagtagtcctgtgaagccaatgcaaagaccaatggccacacac
cctgacaaaactaagcttgaatggatgaataatgggtatagtggagttggtaattcatca
gtttctggccatggaattctcccaagctatcaggaactagtggaagaccgtttcaggaaa
cctcatgcttttgctgtgccagggcagtcttaccagtcccagtcccgacaccatgacact
cattttggtcgtttgactcctgtctctcctgtgcaacatcaaggtgcccctgtaagtaac
accaacaagcaggagggctttgcagtccctgctcctctggataataaaggaactaattcg
tctgccagcagcaacttcagatgccggagtgtgagccccgctgtccatcgccaacgtaat
cttagtggaagtaccctctatccagtgtctaatatcccacggtctaatgtgacccccttt
ggaagtccagtaaccccagaagttaatgttttcacaaatgttcaaaccgacacatgtgcc
aacagcatcgctcagagaagtcagtcagtcccattaacagtcatgatgcagacagctttc
ccaaatgctcttcagaagcaaaccaacagtaaaaaaataaccaatgttttattgagtaaa
cttgactctgacaatgatgatgcagtgagaggtttgggaatgaacaatctgccctccaat
tacacggcccggatgaatctcactcagattctggagacttccactgtttttcctagtgcc
aatccacaaaatatgattgattccagcacttctgtttatgaatttcaaacatcatcttac
ctcaccaaaagtgatagcacggatcagatcagtttttctcccagagataatcaagcacaa
tctgaaattggagagcaacaattagatttcagtagcactgttaaagacctgctgagcgga
gacagcttgcaaaccaaccagcagctggcaggtcaggttgcatcggatctcactaatgct
gcatctgatttccccagtgacatcaggttgtcttctgagctctcaggcagtatcaatgat
ttgaacacgttagacccaaatctactgtttgacccaggtcgtcagcaaggacaagatgac
gaagctacactggaagagttaaagaatgacccattgtttcagcaaatttgcagtgaatcc
atgaactctatgacttcatcaggttttgagtggatagaaagcaaggaccaccctactgtt
gaaatgttgggttaa
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