Ochotona princeps (American pika): 101535103
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Entry
101535103 CDS
T07609
Symbol
SRP54
Name
(RefSeq) signal recognition particle 54 kDa protein isoform X2
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03060
Protein export
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
101535103 (SRP54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
opi02044
]
101535103 (SRP54)
Enzymes [BR:
opi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
101535103 (SRP54)
Secretion system [BR:
opi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
101535103 (SRP54)
Eukaryotic Sec-SRP protein
101535103 (SRP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
nSTAND3
AAA_33
AAA_17
DUF2209
ResIII
NPHP3_N
AAA_22
SRPRB
MeaB
nSTAND_NTPase5
MobB
AAA_30
AAA_19
APS_kinase
Zeta_toxin
6PF2K
AAA_16
PduV-EutP
ATP_bind_1
Thymidylate_kin
AAA
AAA_18
nSTAND_NTPase7
Torsin
ArsA_ATPase
AAA_31
Motif
Other DBs
NCBI-GeneID:
101535103
NCBI-ProteinID:
XP_004584811
LinkDB
All DBs
Position
17:complement(34046517..34105325)
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AA seq
504 aa
AA seq
DB search
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI
DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK
NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggttctggcagaccttggaagaaaaataacatcagcattgcgctcactgagcaatgcc
accattatcaatgaagaggtattaaatgctatgctaaaggaagtatgtacagcattattg
gaagcggatgttaacattaaactagtgaagcaactaagagaaaatgttaagtctgctatt
gatctcgaagaaatggcatctggacttaacaaaagaaaaatgattcagcatgctgtattt
aaagaacttgtgaagcttgtagaccctggagttaaagcatggacacctaccaaaggaaaa
cagaatgtgatcatgtttgttggattgcaagggagtggtaaaactacaacatgttcaaag
ttagcatattattaccagaggaaaggttggaagacctgtttgatatgtgcagatacgttc
agagcaggggcttttgaccaactgaaacagaatgctaccaaagcaagaattccattctat
ggaagctatacagaaatggatcctgttatcattgcttctgaaggagtagagaaattcaaa
aatgaaaattttgaaattataattgttgacacaagtggccgccacaaacaagaagactct
ttgtttgaagaaatgcttcaagttgctaatgctatacaacctgataacattgtttatgtg
atggatgcttccattgggcaggcttgtgaagcccaggctaaggcttttaaagataaagta
gatgtagcatcagtaatagtaacaaaacttgatggtcatgcaaaaggaggtggtgcactc
agtgcggttgctgcaacaaaaagtccaattattttcattggtacaggggaacatatagat
gactttgagcctttcaaaacacagcctttcatcagcaaacttcttgggatgggtgatatt
gaaggactgatagataaagtcaatgagttgaagttggatgacaatgaagcacttatagag
aagttgaaacatggtcagtttacattacgagacatgtatgaacaatttcaaaatatcatg
aaaatgggccccttcagtcagatcttggggatgatcccaggttttggaacagattttatg
agcaaaggaaatgagcaggagtcaatggcaaggctgaagaaattaatgacgataatggat
agtatgaatgatcaagaactggacagtacagatggtgccaaggtttttagtaaacaacca
ggaagaatccaaagagttgcaagaggatcaggagtgtcaacaagggatgttcaagaactt
ttaacacaatataccaagtttgcacagatggtaaaaaagatgggtggtatcaaaggactt
ttcaaaggtggtgacatgtctaaaaatgtaagccagtcacagatggcaaaattgaatcag
caaatggccaaaatgatggatccaagagttcttcatcacatgggtggtatggcaggactt
cagtccatgatgaggcagtttcaacagggtgctgctggcaatatgaaaggcatgatggga
ttcaataatatgtaa
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