KEGG   Ochotona princeps (American pika): 101535127
Entry
101535127         CDS       T07609                                 
Symbol
CDC5L
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
opi  Ochotona princeps (American pika)
Pathway
opi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:opi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101535127 (CDC5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:opi03041]
    101535127 (CDC5L)
   03400 DNA repair and recombination proteins [BR:opi03400]
    101535127 (CDC5L)
Spliceosome [BR:opi03041]
 Complex B
  Other components
   Prp19 complex
    101535127 (CDC5L)
 Complex C
   Prp19-CDC5 complex
    101535127 (CDC5L)
DNA repair and recombination proteins [BR:opi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    101535127 (CDC5L)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect C45G9_C
Other DBs
NCBI-GeneID: 101535127
NCBI-ProteinID: XP_012783890
LinkDB
Position
12:41815644..41887307
AA seq 732 aa
MARLAALQKRRELRAAGIEIQKKRKKKRGVDYNAEIPFEKKPALGFYDTSEENYQALDAD
FRKLRQQDLDGELRSDFFRTWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEK
LLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDNEEETTDDPRKLKPGEIDP
NPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEASEKEGRDRKKD
KQHLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQASEIARQT
AEESGITNSASSTLLSEYNVTNNSIALRTPRTPASQDRILQEAQNLMALTNVDTPLKGGL
NTPLHESDFSGVTPQRQVVQTPNTVLSTPFRGTNFSLQERESREHLRLGLLGLPAPKNDF
EIVLPENAEKELEEREVDDAYIEDAADVDARKQAIRDAERAKEMKRMHKAVQKDLPRPSE
VNETILRPLNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKTVGFGTNNS
EHITYLEHNPYEKFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLY
LPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMG
LMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQHRYAD
LLLEKETLKSKF
NT seq 2199 nt   +upstreamnt  +downstreamnt
atggcgcgtcttgctgccctccaaaaaaggagagaactgcgtgcagctggcatagaaatt
cagaagaaaagaaagaagaagagaggagttgattataatgctgaaattccgtttgagaaa
aagcctgcacttggtttttatgacacttctgaggagaactaccaggctcttgatgcagat
ttcaggaagctgaggcaacaggatctggacggagagctgagatctgatttctttcgtacg
tggtctaggattgcctcactgctgcatagaaaatcagcaaagcagtgcaaagccagatgg
tatgagtggctagatccaagcattaagaaaacagaatggtccagagaagaagaggaaaaa
ctcctacacttggctaagttgatgccgactcagtggaggaccattgctccaatcatcgga
agaactgcggcccagtgcttagaacattatgaatttctcctggataaaactgctcaaaga
gacaatgaagaagaaacaacagacgacccacgaaaacttaaacccggagaaatagaccca
aatccagaaacaaaaccagcacgacctgatccaattgatatggatgaggatgaacttgag
atgctttctgaagccagagctcgtctagctaatactcagggaaagaaggccaagaggaaa
gccagagagaaacagttggaagaagcaagtgaaaaagagggaagagatagaaaaaaagac
aaacagcatttgaaaaggaaaaaagaatctgatttgccatcagctattcttcaaactagt
ggtgtttctgaatttactaagaagagaagcaaattagtacttcctgcacctcagatttca
gatgcagaactccaagaagttgtaaaagtaggccaggcaagtgaaattgcccgtcagact
gctgaggaatctggcataaccaactctgcttccagtactctgctgtctgaatataatgtc
accaacaacagcatcgctctgagaacaccacggactccagcgtcccaggacagaattctg
caggaagcccagaacctcatggccttgaccaatgtggacaccccattaaaaggtggactt
aacactccactgcatgagagtgacttttccggtgtgacgcctcagcgacaggtggttcag
actccaaacacagttctgtcaactccgttcaggggaaccaatttttctctacaggaaaga
gaatctcgtgagcatctccgtttagggttgttgggccttcctgcccctaagaatgatttt
gaaattgttctaccagaaaatgctgagaaggagctggaggagcgggaagtagacgatgct
tatattgaagatgctgctgatgtggatgcccgaaagcaggccattcgagatgcagagcgt
gcaaaagaaatgaagcgaatgcacaaagctgtccagaaagatctgccaagaccatcagaa
gtaaatgaaactattttaagacccttaaatgtagaaccacctctgacagacttacagaaa
agcgaagaactaatcaaaaaagaaatgattacaatgctccattatgatcttctccatcac
ccttatgaaccatctgggaataaaaaaggcaaaactgtaggatttggtactaataattca
gagcacattacctatctggaacataatccttatgaaaagttctccaaagaagagctgaaa
aaggcccaggatgttctggtgcaggagatggaagtggtgaaacaaggcatgagccatgga
gaactctcaagtgaggcttataaccaggtgtgggaagaatgctacagccaagttttgtat
cttcctgggcagagccgctacacccgggccaatctagctagcaaaaaggacagaatcgaa
tcacttgaaaagaggcttgagataaacaggggtcacatgaccacagaagccaagagagct
gcaaagatggaaaagaagatgaaaattttgcttgggggttaccagtcacgtgctatgggg
cttatgaaacaattgaatgatttgtgggaccaaattgagcaggcacacttggagttacgc
acttttgaagaactgaagaaacatgaagattctgccattccccggagattagagtgtcta
aaagaagatgttcagcgacaacaggaaagagaaaaggaacttcagcatagatacgctgat
ctgctgctggagaaagagactttaaagtcaaaattctga

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