Ochotona princeps (American pika): 101535199
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Entry
101535199 CDS
T07609
Name
(RefSeq) LOW QUALITY PROTEIN: GATOR complex protein WDR24-like
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
101535199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101535199
Membrane trafficking [BR:
opi04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
101535199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_RIG_2nd
WD40
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
zf-RING_16
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
101535199
NCBI-ProteinID:
XP_036348681
LinkDB
All DBs
Position
5:18263990..18266353
Genome browser
AA seq
787 aa
AA seq
DB search
MEKMSHLTTALGGGMLTGHTMHCHLDAPANAISVCRDAAQVVVAGRSIFKTYAIEEEGFM
ERLNLRVGRKPALNLSCADVVWHQMDENLLATAATNGVVVTWNLGWPSRNKQDQLFTEHK
RTVNKVCFHPTEAHVLLSGSQDGFMKCFDLRRKDSVSTFSVQSESVRDVQFSIRDYFTFA
YTFENGNVQLWDIRRPDSCKRMFTAYNGPVFCCDWHPEDRGWLATGGRDKMVKMWDMSTP
RAKETHCVQTIASVARVKWRPEFRHRLATCSMMVDHIYVWDVRRPFVPAAMFEEHRDVTT
GITWRHPHDPCFLLSGSKDSTLCQHMFHDASQPVERANPEGLCYGLFGELAFAAKESLVT
ADGGRRPYASDWHPPIFFKRKLDPTEPFSGLASSALSVFETEPAAGVMHWFVNTAQRYAL
AGQPLAELCDHNAKVVQKLGHNQVAQTWTMLRIIYCSPGSVSATSVNHSAGKSSTCGLPL
LNSFNLKNVAPELGSETRLDRSKGDARSDTALLDSSATLLTNEDNEETEGSDVPADYLLG
DAEGDEELYLLDTEHAHPEDPEYVLPQEAFPVRHEIVDTLPGPEQLQDKDESPHVSGSEA
DAASLAPADTFSLLSVSHALYDSLLPSDFFGVLVRDMLHFYAEGGDVQMVVSVLIVLGEG
VHKGIDEQTQEHWYTSCVDLLQRFRLWNVSNKVVKLSTSRAISCLNQASTTLHINCSHCK
RPMSSRGWVCDRCHCXASMCTVCHHVVKGLFVWCQGCSHGGHLQHIMKWLEGSSQCPAAC
GHLCEYS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatgtcccacttgaccacggccctgggtggcggcatgctgacaggccacacc
atgcactgccacctggacgcgccggccaacgccatcagcgtgtgccgggacgcagcacag
gtggtggtggctggccgcagcatcttcaagacctacgccattgaggaggagggcttcatg
gagaggctcaacctgcgtgtgggccgtaagcccgcgctcaacctcagctgtgctgacgtg
gtctggcaccaaatggatgagaacctgctggccacggctgccaccaacggcgtggtggtc
acgtggaacctgggctggccgtctcgcaacaagcaggaccagctgttcacagagcacaag
cgcacagtgaacaaggtctgcttccatcccacagaggcccacgtgctgctcagcgggtcc
caggacggcttcatgaagtgctttgacttgcgccgcaaagactcggtcagcaccttctca
gtacagtccgagagcgtgcgcgacgtccagttcagcattcgcgactacttcaccttcgca
tacaccttcgagaatggcaacgtacagctgtgggacatccggcggccagacagctgcaag
aggatgttcacggcctacaacgggcccgtcttctgctgtgactggcaccctgaggacagg
ggctggctggccacaggtgggcgggacaagatggtgaagatgtgggacatgagcacgccc
cgggccaaggagacgcactgcgtgcagaccatcgcctccgtggcccgagtcaagtggagg
cccgagttccgccaccgcctggccacctgctccatgatggtggaccacatctatgtgtgg
gatgtgcggcgcccctttgtgccagccgccatgttcgaggagcaccgtgacgtgactact
ggcatcacctggcgccacccacacgacccatgcttcctgctgtcgggctccaaggacagc
acgctgtgccagcacatgtttcatgatgccagccaacctgtggagcgcgccaaccccgag
ggcctctgctacggtctctttggggaactggcctttgctgccaaggaaagcctggtgacc
gctgatggggggcgtaggccctatgccagtgactggcaccctcctatcttcttcaagcgc
aagctggatcccactgagcccttctcgggactggcctccagtgccctcagcgtctttgag
acagagcccgcagccggtgtcatgcactggttcgtgaacacggcccagcgctatgctctg
gctggccagccgctggccgagctctgtgaccacaatgccaaggtggtgcagaagctaggt
cacaaccaggtggcgcagacgtggaccatgctgcggatcatctactgcagcccggggtcg
gtatccgccaccagcgtcaaccacagtgcgggcaagagcagcacctgtggcctgccactc
ctgaacagtttcaacctgaaaaatgtggccccggagctgggcagcgagacacgactggac
cgcagcaagggagatgcccggagtgacacagccctgcttgactcctcagccacactgctc
accaatgaggacaacgaggagacggagggcagcgacgtgccggccgactatctgctgggt
gatgctgagggcgacgaggagctgtacttgctggacactgaacacgcgcaccccgaggac
cccgagtacgtgctgccgcaggaggccttcccagtgcgccacgagattgtggacacgctg
ccggggccagagcagctgcaggacaaggatgagtccccacacgtgagtggcagcgaggcg
gacgcggcctccctggcccctgcggacactttctcgctgctgtctgtgtcccacgcgctg
tacgacagcctgctgccctccgacttctttggggtgctggtgcgggacatgctgcacttc
tacgcagaggggggcgacgtgcagatggtcgtgtccgtgctcattgtgctgggcgagggc
gtgcacaaaggcatcgacgagcagacacaggagcactggtacacatcctgcgtggacctg
ctgcagcgcttccggctctggaacgtgtccaacaaggtggtcaagctgagcaccagccgg
gcgatcagctgcctcaaccaggcctccaccacgctgcacatcaactgcagccactgcaag
cgacccatgagcagccgcggctgggtctgtgacaggtgccactgctgagccagcatgtgc
accgtctgccaccacgtggtcaagggcctgttcgtgtggtgccagggctgcagccatggc
ggccacttgcagcacatcatgaagtggctggagggcagctctcagtgtccggccgcctgt
ggccacctgtgcgagtactcctga
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