Ochotona princeps (American pika): 101535274
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Entry
101535274 CDS
T07609
Symbol
SLC8A1
Name
(RefSeq) sodium/calcium exchanger 1 isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04020
Calcium signaling pathway
opi04022
cGMP-PKG signaling pathway
opi04260
Cardiac muscle contraction
opi04261
Adrenergic signaling in cardiomyocytes
opi04371
Apelin signaling pathway
opi04740
Olfactory transduction
opi04961
Endocrine and other factor-regulated calcium reabsorption
opi04974
Protein digestion and absorption
opi04978
Mineral absorption
opi05410
Hypertrophic cardiomyopathy
opi05412
Arrhythmogenic right ventricular cardiomyopathy
opi05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
101535274 (SLC8A1)
04020 Calcium signaling pathway
101535274 (SLC8A1)
04022 cGMP-PKG signaling pathway
101535274 (SLC8A1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
101535274 (SLC8A1)
04261 Adrenergic signaling in cardiomyocytes
101535274 (SLC8A1)
09154 Digestive system
04974 Protein digestion and absorption
101535274 (SLC8A1)
04978 Mineral absorption
101535274 (SLC8A1)
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
101535274 (SLC8A1)
09157 Sensory system
04740 Olfactory transduction
101535274 (SLC8A1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
101535274 (SLC8A1)
05412 Arrhythmogenic right ventricular cardiomyopathy
101535274 (SLC8A1)
05414 Dilated cardiomyopathy
101535274 (SLC8A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
opi02000
]
101535274 (SLC8A1)
00536 Glycosaminoglycan binding proteins [BR:
opi00536
]
101535274 (SLC8A1)
Transporters [BR:
opi02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
101535274 (SLC8A1)
Glycosaminoglycan binding proteins [BR:
opi00536
]
Heparan sulfate / Heparin
Others
101535274 (SLC8A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
101535274
NCBI-ProteinID:
XP_004582813
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All DBs
Position
2:complement(31251374..31592803)
Genome browser
AA seq
969 aa
AA seq
DB search
MLRLRLSSTFSMGFHLLAIVALLFFHVDHISAETEMEGEGNETECTGSYYCKKGVILPIW
EPQDPSFGDKIARATVYFVAMVYMFLGVSIIADRFMSSIEVITSQEKEITIKKPNGETTK
TTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHNFTAGDLGPSTIVGSAAFNMFIIIA
LCVYVVPDGETRKIKHLRVFFVTAAWSIFAYTWLYIILSVISPGVVEVWEGLLTFFFFPI
CVVFAWVADRRLLFYKYVYKRYRAGKQRGMIIEHEGDRPSSKTEIEMDGKVVNSHVDNFL
DGALVLEVDERDQDDEEARREMARILKELKQKHPEKEIEQLIELANYQVLSQQQKSRAFY
RIQATRLMTGAGNILKRHAADQARKAVSMHEVNTEVAENDPVSKIFFEQGTYQCLENCGT
VALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVVFKPGETQKEIRVGIIDDDI
FEEDENFLVHLSNVKVSLETSEDGILEANHVSTFACLGSPCTATVTIFDDDHAGIFTFEE
AVTHVSESIGIMEVKVLRTSGARGNVIVPYKTIEGTARGGGEDFEDTCGELEFQNDEIVK
TISVKVIDDEEYEKNKTFFLEIGEPRLVEMSEKKALLLNELGGFTITGKYLCGQPVFRKV
HARDHPIPSTVITIADEYDDRQPLTSKEEEERRIAEMGRPILGEHTKLEVIIEESYEFKS
TVDKLIKKTNLALVVGTNSWREQFIEAITVSAGEDDDDDECGEEKLPSCFDYVMHFLTVF
WKVLFAFVPPTEYWNGWACFIVSILMIGLLTAFIGDLASHFGCTIGLKDSVTAVVFVALG
TSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHAANGEQFKVSP
GTLAFSVTLFTIFAFINVGVLLYRRRPEIGGELGGPRTAKLLTSCLFVLLWLLYIFFSSL
EAYCHIKGF
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgttgagattaaggctctcatccacattctccatgggatttcatctgttagctattgtg
gctctcctgtttttccatgtggaccatataagtgctgagacagaaatggaaggagaagga
aatgaaactgagtgtactggctcatattactgtaagaaaggggtgatcttgcccatttgg
gaaccccaagatccttcttttggggacaagattgctagagctactgtatactttgtggcc
atggtctacatgtttctcggagtctctatcatagctgacaggttcatgtcctcaatagaa
gtcattacatctcaagaaaaagaaattaccatcaaaaagcccaatggagagaccaccaag
actactgtgaggatctggaatgagaccgtttctaacttgaccctgatggccctgggatct
tctgctccggagattctgctttcggtcatcgaagtgtgtggccataacttcactgcagga
gacctaggtcctagcaccattgtgggaagtgctgccttcaacatgttcatcatcattgcg
ctctgtgtttacgtggtcccagatggagagaccaggaagattaagcacctgcgcgtattc
ttcgtgactgcagcctggagcatatttgcctatacttggctctacatcatcttgtctgtt
atctcgcctggtgttgtggaggtttgggaaggtttactcactttcttcttttttcccatc
tgtgtggtgttcgcttgggtagcagataggaggcttctgttttacaagtatgtctacaaa
aggtatcgggctggtaagcagaggggaatgatcattgaacacgaaggagacaggccgtct
tccaagactgaaattgaaatggatgggaaagtggtcaactctcatgttgacaatttctta
gatggcgctctggttctggaggtggatgagagagaccaagatgatgaagaggctagacga
gaaatggctaggattctgaaggaactgaagcagaagcatccagagaaggaaatagagcaa
ttaatagagttagcaaactaccaggtcctaagtcaacagcaaaagagtcgagccttttac
cgcatacaggctactcgcctgatgactggagctggcaacattttaaagaggcatgccgct
gaccaagctcggaaggctgtcagcatgcatgaggtcaacacggaagtggctgaaaatgat
ccagttagcaagatcttctttgaacaagggacctaccagtgtctggagaactgtggtact
gtggccctgaccattatccgtcgagggggtgatttgaccaacactgtgttcgttgacttc
agaacagaggatgggacagccaatgctgggtctgactatgaatttactgaagggactgtg
gtcttcaagcctggggagacccagaaggaaattcgagtcggcatcattgatgatgatatc
tttgaggaagatgaaaatttccttgtgcacctcagcaatgtcaaagtatctttggaaact
tctgaagatggcatactggaagccaatcatgtctctacctttgcctgcctgggatcccct
tgcactgccacagtaactatttttgatgatgaccatgcaggcatctttacctttgaggaa
gctgtgacccatgtgagtgagagcattggcatcatggaggtgaaagtgttgagaacatct
ggagcccgaggaaatgttattgttccctataaaaccattgaaggaactgccagaggtgga
ggggaggactttgaggacacttgtggagaactcgagttccagaacgacgagattgtcaaa
acaatatcagtcaaggtaattgatgatgaggagtatgagaaaaacaagaccttcttcctt
gagattggagagccccgcctggtggagatgagtgagaagaaagccctgttgttgaatgag
cttggtggcttcacaattacaggaaaatacctgtgtggccaacctgtcttcaggaaagtt
catgctagagatcatcctattccctctaccgtaatcaccattgcagatgaatatgatgac
agacagccactgaccagcaaagaggaagaggagaggcgcattgcagaaatggggcgccct
atcttgggagaacacaccaagttagaagtgatcattgaagaatcctatgagttcaagagt
actgtggataaactcattaagaagacaaacctggcccttgtggttggcacaaacagctgg
agggaacagttcattgaagcgatcacggtcagtgctggagaagatgacgacgatgacgaa
tgtggggaggaaaagctgccctcctgtttcgattacgtgatgcactttctgaccgtgttc
tggaaggtcctctttgccttcgtcccccctacagaatactggaatggctgggcctgtttc
atcgtctccatcctcatgattggcctgctgacagctttcattggcgacctggcttcccac
tttggatgcaccattggcctgaaagattccgtgactgcagtggtgtttgtcgcacttgga
acttcagtgccagacacctttgccagcaaagtggcagccacccaggaccagtatgctgat
gcctccataggtaacgtcactggcagcaatgctgtgaatgttttcttgggaatcggcgtg
gcttggtccattgccgccatctaccacgcagccaatggggaacagttcaaagtgtcccct
ggcacgttggctttctctgtcactctcttcaccatttttgctttcatcaatgtgggagtg
ctgctgtatcggcggaggccagaaattggaggtgagctaggcgggccccggactgccaag
ctcttgacatcctgcctctttgtgctcctgtggctcttgtacattttcttctcttccctg
gaggcctactgccacataaaaggcttctaa
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