Ochotona princeps (American pika): 101535304
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Entry
101535304 CDS
T07609
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opi03009
]
101535304 (DDX52)
Enzymes [BR:
opi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101535304 (DDX52)
Ribosome biogenesis [BR:
opi03009
]
Eukaryotic type
90S particles
Helicases
101535304 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
101535304
NCBI-ProteinID:
XP_004591238
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All DBs
Position
19:24379437..24405448
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AA seq
532 aa
AA seq
DB search
MDAHELFRRLGAGAKFDVRRFSADAARFQIGKRKNGLDPSEVLQGLDFFGNKKSAPDERA
ASQTPGQPGKEEATEETQAERQRKKRRKMASEITLQEDTTIQWTSSVEAKIEDERAKAEP
KLTSGKLENLRKEKGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELA
SQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGI
DLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQWCKLN
LDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFSPPVLVFVQSIERAKE
LFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINY
DFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVIQQAGCPVPEYIKGFQK
LLSKQKKKMIKKPLERESISTTPKFFLEQAKAKRKKFAGQKSKKKVAPEDKS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggatgcccatgagctctttcgccgcctcggtgcgggcgccaaattcgacgtgaggcgc
ttctcggccgacgcagcgcggttccagataggcaaaagaaagaatggcttggatccttca
gaggtgctgcaggggctggacttctttggaaacaaaaagtcagcaccagatgagcgggca
gcgtcacagactccggggcagcccggaaaggaagaggcaacggaagaaacccaagctgaa
aggcagaggaagaagaggaggaagatggcttcagaaattactttgcaagaagataccacc
attcagtggacatcatctgtggaagccaagatcgaagatgaaagagctaaagcagaacct
aaactaacgtcaggaaaactggagaatctcaggaaggagaagggtcgagaacttctggca
tctgctcctaccggatctgggaaaacgttggctttcagcattcctattttaatgcagctg
aaacaacccacaaataaaggcttccgagcactgattatatccccaacacgagaacttgcc
agccagattcaccgagaattaattaaaatctctgagggaacagggttcaggatacacatg
attcacaaagcagcagtggcagccaagaaatttggacctaagtcatctaagaagtttgat
attcttgtgacaactccaaatcgattaatctatttattaaagcaagatccaccaggaata
gacttaacgagtgttgagtggctggtagtagatgagtcagacaaactgtttgaagatggc
aaaaccggatttagagaccaactggcttcgattttcctggcctgcacatcccacaaggtc
aaaagagctatgttcagtgcaacttttgcatatgatgttgaacagtggtgcaaactcaac
ttggacaacgtcatcactgtgtccattggagcaaggaactctgcagtggagactgtagaa
caagaacttctctttgtggggtctgagactggaaaacttctggccatgagagaactcgtt
aagaagggtttcagtccacctgttcttgtttttgttcagtccattgaaagagctaaagaa
ctttttcatgaactcatatatgaaggaattaatgtggatgtcatccatgcagagagaact
cagcaacagagagataacacagtgcacagcttcagagctgggaagatctgggttctcatc
tgtacagccttgctggccagagggattgactttaaaggtgtgaacctggtgatcaactat
gacttcccaaccagctctgtggaatatatccacaggataggtcgaactggaagagcagga
cataaggggaaagctgttacatttttcacagaagatgataaaccattattaagaagtgtt
gccaatgttatacagcaggctggatgtcctgtgccagaatatataaaaggtttccaaaaa
ttattaagcaaacaaaagaaaaagatgattaagaagccattggaaagagaaagtatcagt
acaactccaaaattttttttagagcaagctaaggctaaacggaaaaagtttgctggtcag
aaaagcaagaagaaagtcgctcctgaagataaaagttaa
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