Ochotona princeps (American pika): 101535434
Help
Entry
101535434 CDS
T07609
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101535434 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opi03021
]
101535434 (TAF5)
03036 Chromosome and associated proteins [BR:
opi03036
]
101535434 (TAF5)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101535434 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
101535434 (TAF5)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101535434 (TAF5)
STAGA complex
101535434 (TAF5)
TFTC complex
101535434 (TAF5)
SAGA complex
101535434 (TAF5)
SLIK complex
101535434 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
PROPPIN
Motif
Other DBs
NCBI-GeneID:
101535434
NCBI-ProteinID:
XP_004579943
LinkDB
All DBs
Position
18:complement(22193355..22209765)
Genome browser
AA seq
801 aa
AA seq
DB search
MAALAEEQTEVAVKLEAEGPPTLLPPQAGDGTSEGSVGLTNNGPNGGGGNVAAAASSSAG
GDGGTPKPAVAVSAAAPAGAAPVPAAAPDAGAPHDRQTLLAVLQFLRQSNLREAEEALRR
EARLLEEAGAGSGAPGEVDGAGAEATSALLSRVTASAPGPAAPDPPGTGASGATVVSGSA
SGPAAPGKVGIVAVEDQPDVSAVLSAYSQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQ
LFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETML
DFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGS
LAGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPRKDSIGSKSKKQD
PNAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDV
TDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKI
LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY
YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN
GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLR
FSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKST
PVVHLHFTRRNLVLAAGAYSP
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagaggctgagggaccg
ccgacgttactacctccgcaggcgggcgatggcacaagcgagggcagcgtcgggcttacc
aacaacggccccaatggcggtggcgggaacgtggcggcggcggcatcatcgtcggccggc
ggggatggcgggacccctaagcccgcggtggctgtctccgctgctgccccggcgggggcg
gccccggttcccgccgctgccccagacgccggcgctccccacgaccgacagactctgctg
gcggtgctgcagtttctacggcagagcaacctccgcgaggcggaagaggcgctgcgccgc
gaggcccggctgctggaggaggcaggagcgggctccggagccccgggagaggtggatggc
gcgggcgctgaggcgactagcgcgcttctcagccgggtcaccgcctcggcccccggcccc
gcggccccagaccctccgggcaccggcgcttcgggggcgacggttgtctcgggctcagcc
tcaggtcctgcggctccggggaaagttggaattgtagctgtggaagaccagccagatgtc
agtgctgtgttatcagcctacagccaacaaggagatcccacaatgtatgaagagtactat
agtggactcaaacacttcattgaatgttccctggactgccatcgggcagaattatcccaa
ctcttttatcccctgtttgtgcacatgtatttggagctagtctacaatcaacacgagaat
gaagccaaatcattctttgaaaagttccatggagatcaggaatgttattaccaggatgac
ctacgagtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttg
gattttcgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaag
aggcatcttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctac
attgacatctttgatgggatgccgcgtagtaagcagcagatagatgcgatggtgggaagt
ttggcaggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaa
gaaccagaaattgaggtacctttggatgatgaggatgaagagggagaaaatgaagaagga
aaacctaaaaagaaaaagcctagaaaagatagtatcggatccaaaagtaaaaagcaagat
cccaatgctccacctcagaacagaatccctcttcctgagttgaaagactcagataagttg
gataagataatgaatatgaaagaaaccaccaaacgagtacgccttggcccagactgctta
ccctccatttgtttctacacattcctcaatgcttaccagggccttactgcagtggatgtc
actgatgattctagtctcattgctggaggttttgcagattccactgtcagagtatggtct
gtgacacccaaaaagcttcgcagtgtcaagcaagcatctgatcttagcctcatagacaaa
gaatcggatgatgtcttagaaagaatcatggatgagaaaacagcaagtgagttgaagatt
ctgtatggtcacagtgggcctgtctatggagccagcttcagcccggataggaactatctg
ctttcttcttcagaggatggaactgtcagattgtggagccttcaaacatttacttgctta
gtaggatataaaggacacaactacccagtatgggacacacagttttctccctatggatac
tattttgtgtcagggggccacgaccgtgtagctcggctgtgggctacagatcactatcaa
cctctaaggatatttgctggccatctagccgatgtgaactgcaccagattccatccaaat
tctaattatgttgctacgggctctgcagacagaactgtacggctctgggatgtcttgaat
ggtaactgtgtaagaatcttcactggacacaagggaccaattcattccttgacattttct
cccaatgggagattcctggctacaggagcaacagatggcagagtactcctttgggatatt
ggacatggcttgatggttggagaattaaaaggccacactgatacagtctgctcacttagg
ttcagtagagatggcgaaattttggcatcaggttcaatggacaatacagttcggttatgg
gatgctatcaaagcatttgaagatttagagactgatgactttactacagccactgggcac
ataaacttacctgagaattcacaggagttactgctaggaacatatatgaccaaatcaaca
ccagttgtacacctccattttactcgaagaaacctggttctagctgcaggagcttacagt
ccataa
DBGET
integrated database retrieval system
