Ochotona princeps (American pika): 101535523
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Entry
101535523 CDS
T07609
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101535523 (FUBP1)
03041 Spliceosome [BR:
opi03041
]
101535523 (FUBP1)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
101535523 (FUBP1)
Spliceosome [BR:
opi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101535523 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
101535523
NCBI-ProteinID:
XP_004582156
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All DBs
Position
13:complement(67524727..67561549)
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AA seq
663 aa
AA seq
DB search
MADYSTVPPPSSGSAGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGYGG
QKRPLEDGDGSWTSLSSTTHWEGMPSPFKDQPDAKKVAPQNDSFGTQLPPMHQQQSRSVM
TEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAK
RLLDQIVEKGRPTPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVM
IQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVP
IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITD
LLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKS
ISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHG
PHGVPGPHGPPGPPGPGAPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQA
PPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPATTQTNGQGDQQNPAPAGQVD
YTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAP
QGQ
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcggactactccacggtgcctcctccttcgtctggctcggctggtggcggtggcggt
ggcggaggaggagtgaacgacgccttcaaagatgcactgcagcgagcccggcagattgca
gcgaaaattggaggtgatgctggtacatcactgaattcaaatgactatggttatggagga
caaaaaagacccttagaagatggagatggctcttggacaagtctgagcagtacaacacac
tgggagggaatgccctctccttttaaagatcagccagatgctaagaaagttgctcctcaa
aatgactcttttggaacacagttaccaccgatgcatcagcagcaaagcaggtctgttatg
acggaagaatacaaagttccagatggaatggttggctttataattggcagaggaggtgaa
cagatatcacgcatacagcaagaatctggatgcaaaatacagatcgcccctgatagtggt
ggcctaccagaaagatcttgtatgttgactggaacacccgaatcagtccagtcagcaaag
cgattattggaccagattgtcgaaaaaggaagaccaacccctggctttcatcatggtgat
ggaccaggaaatgcagttcaggaaatcatgattccagctagcaaggcaggattagttatt
ggaaagggaggagagactattaaacaacttcaggaacgagctggagttaaaatggttatg
attcaagatggacctcaaaacactggtgctgacaaaccccttaggattacaggagatcca
tacaaagttcagcaagccaaggaaatggtgttggagttaatacgtgatcaaggtggtttc
agagaagttcgaaatgagtatgggtcaagaataggaggaaatgaagggatagacgtcccc
attccaagatttgctgttggcattgtaataggaaggaatggagagatgatcaaaaaaata
caaaatgatgctggtgttcggattcagttcaagccagatgatggaacaacacctgataga
atagcacaaataacaggacctccagaccgatgtcaacatgctgcagaaattattacagat
cttcttcgaagtgttcaggctggtaatcctggtggacctggacctggtggccgaggaaga
ggtagagggcaaggcaactggaatatgggaccacctggtggactacaagaatttaatttc
attgtgccaactggaaaaactggattaataataggaaagggaggtgaaactataaaaagc
ataagccaacagtccggggcacgaatagaacttcagagaaatcctccacctaatgcagat
cctaatatgaagttatttacaatccgcggcactccacagcaaattgactatgctcggcaa
ctcatagaagaaaagattggtggcccagtaaatcctctagggcctcctgtaccccatggg
ccccatggtgtcccaggcccccacgggcctcctgggcctccagggcctggagccccaatg
ggaccgtacaatcctgcaccttataatccaggaccacctggcccagctcctcatggtcct
cctgcgccttatgctccccaagggtggggaaatgcgtatccacactggcagcaacaagct
ccccctgatccagccaaggcaggaacggatccaaattcagcagcttgggctgcttattat
gctcactattaccaacaacaagcacaaccgccacctgcagctcctgcaggtgctccagct
acaacccaaactaacggacaaggagatcagcagaatccagctccagctggtcaggttgat
tatacaaaggcttgggaagaatactacaaaaaaatgggtcaagcagttcctgctcctact
ggtgctccaccaggtggccagccagattatagtgcagcctgggccgagtactatagacaa
caggcagcctactatgcccagaccagtccccagggaatgccacagcaccctccagcacct
cagggccaataa
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