Ochotona princeps (American pika): 101535549
Help
Entry
101535549 CDS
T07609
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101535549 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101535549 (CSTF2)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
101535549 (CSTF2)
U7-dependent histone pre-mRNA processing factors
101535549 (CSTF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
101535549
NCBI-ProteinID:
XP_004590183
LinkDB
All DBs
Position
X
Genome browser
AA seq
596 aa
AA seq
DB search
MAGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGETIS
PEDAPESISKAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTNIPTLITGNPQPVHAAGPGSAPGVPMNQQNPQAPQAQALGGMHVN
GAPPLMQASMQGGVPAPGQMPAAVTGPGPGPLAPGGGMQTQVGMPGGGPVAMERGQGTLQ
HSPVGPTGPASIERVQVPMQDPRAALQRGSLPANVPTPRGLLGDAPNDPRGGTLLSVTGD
VEPRGYLGPPHQGPPMHHVPGHESRGPPPHEMRGGPLAEPRPLMAEPRGPMLDQRGPPLD
GRGGRDPRGMDARSMEARAMEARGLDARAMEARAMEARAMEARAMEARAMEARAMEVRGM
EPRGMDPRGPVPGPRGPLPGGIQGPNPMNMAVGPQGGRQVPVMQGAGLQGGSLQGGSQPG
AFSPGQNQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttgacggttagagaccctgcggtggatcgttctctacgttcagtatttgtg
ggaaacattccttatgaagctaccgaagaacaattaaaggacatcttttctgaggttggg
cctgttgttagtttcagattggtatatgatagggagacaggaaaaccaaagggttatggc
ttctgtgaatatcaagaccaagagacagcacttagtgccatgcggaacctgaatgggcgt
gagttcagtggaagagcgcttcgagtagacaatgcggccagtgaaaagaacaaagaagag
ctgaagagccttggcactggtgccccagtcattgagtcaccttacggagagaccatcagt
cccgaggatgcccctgagtcaattagcaaagcagttgccagtcttccaccagagcagatg
tttgagctgatgaaacaaatgaagctctgtgtccagaatagtcctcaggaagcacggaac
atgctgcttcagaaccctcagctggcttatgctctgctgcaggcacaggtggtgatgaga
attgttgatccagagattgccctgaaaattctgcatcgccaaacaaatattccaacactg
attacaggcaacccccagccagtccatgctgctgggcctggctcagcacccggtgtgcca
atgaaccagcagaatcctcaggctcctcaggcccaggctttgggtggaatgcatgtcaat
ggtgcacctcctcttatgcaagcctctatgcaaggtggtgttccagcaccagggcagatg
ccggctgctgtcacaggacctggccctggtcccttagctcctggagggggaatgcagacc
caggttgggatgccaggaggtggaccggtggccatggaacgaggacaaggaaccctacag
cactcgcccgtgggacccaccgggcctgcatcaattgagcgagttcaagtgccgatgcaa
gaccccagagcagctctgcagcgaggatctttgcctgccaatgttccaactcctcgaggt
cttttgggagatgctccgaatgacccacgaggaggcactttactttctgtcactggagat
gtagagcctagaggttacctgggaccacctcatcagggtccacccatgcaccatgtccct
ggccatgaaagccgtggaccacccccacatgagatgaggggagggcctctagctgagcct
agacctctaatggccgagccaagaggacctatgctagatcagaggggtccaccattggat
ggcagaggtggacgagatccacgaggaatggatgcacgaagtatggaggctcgagccatg
gaggcaagaggattagatgccagagcaatggaagcccgtgctatggaggctcgtgccatg
gaggctcgcgctatggaggcccgtgccatggaggcccgtgccatggaagtcagagggatg
gagcccagaggcatggatcccagaggcccagtgcctggccctagaggacctctacctggt
ggaatccaaggtcccaatccaatgaatatggcagttggccctcagggaggtagacaggtc
ccagtcatgcagggagcagggttgcaaggaggaagtctgcagggtggaagccagcctggt
gcctttagtcctgggcagaaccaagtcactccacaggatcatgagaaggctgctttgatc
atgcaggttcttcagctgactgcagaccagattgccatgctgcctccagagcaaaggcag
agtatcttaattttgaaggaacaaatccagaaatccactggagcgccttaa
DBGET
integrated database retrieval system
