Ochotona princeps (American pika): 101535557
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Entry
101535557 CDS
T07609
Symbol
PPIL2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101535557 (PPIL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opi03041
]
101535557 (PPIL2)
03110 Chaperones and folding catalysts [BR:
opi03110
]
101535557 (PPIL2)
04121 Ubiquitin system [BR:
opi04121
]
101535557 (PPIL2)
Enzymes [BR:
opi01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
101535557 (PPIL2)
Spliceosome [BR:
opi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
101535557 (PPIL2)
Complex C
U4/U6.U5 tri-SnRNP related factors
101535557 (PPIL2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
101535557 (PPIL2)
Chaperones and folding catalysts [BR:
opi03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
101535557 (PPIL2)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
U-box type E3
101535557 (PPIL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
U-box
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
101535557
NCBI-ProteinID:
XP_004592099
LinkDB
All DBs
Position
21:complement(20351744..20384368)
Genome browser
AA seq
520 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTHFYGGKKPDLPQSNFRRLPFDHCSLSLQPFVYPVCTPEGVV
FDLLNIVPWLKKYGTNPSNGEKLDGRSLIKLNFTKNSEGKYHCPVLFTVFTNNTHIVAVR
TTGNVYAYEAVEQLNIKAKNFRDLLTDEPFSRQDIITLQDPTNLDKFNVSNFFHVKNNIK
IVDPDEEKARQDPCYYLKNTNAETRETLQELYKEFKGDEVLAATMKVPEKKKVDKLNAAH
YSTGKVSASFTSTAMIPETTHEAAAIDEDVLRYQFVKKKGYVRLHTNKGDLNLELHCDLT
PKTCENFIKLCKKQYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNLSH
TGRGVLSMANSGPNSNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTAMENVESDPKTD
RPKTDIRIEATTVFVDPYEEADAQIAEERKKTQLDEEPEAKAKTPQSQPGSQGPQTYRQG
VGKYINPAATRRAAEEPSTSTAAPAAKRKPGRGFGDFSSW
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaacgacagcaccagaaggacaagatgtacattacttgtgcggaatacactcac
ttctatggcggcaagaagccagatctcccacaatccaattttcggcgactgccgttcgac
cactgcagtctctccctacagcccttcgtgtaccccgtctgcacccctgaaggcgtcgtc
ttcgacttgctgaacatcgttccctggctgaagaagtacgggaccaaccccagcaatggg
gagaaacttgatgggcgctccctgatcaagctgaacttcaccaagaacagcgaggggaag
taccactgccccgtgctgttcaccgtgttcaccaataacacccacatcgtggccgtcagg
accaccggcaacgtctatgcttatgaggctgtggaacagctgaacatcaaggccaagaac
ttccgggacctgctgaccgatgagcccttttcccggcaggacatcatcaccctgcaggac
cccaccaatctggacaagttcaatgtctccaatttctttcatgtcaagaataacataaaa
atagtggatccagatgaggagaaggcccgacaggacccctgctactacctgaagaacacc
aacgccgagacccgggagacgctgcaggagctctacaaggagttcaagggcgacgaggtc
ctggccgccaccatgaaagtgcccgagaagaagaaagtggacaagctgaatgctgcccac
tactccacgggcaaggtcagcgcatccttcacctccaccgccatgattcctgagaccaca
cacgaagcagctgccatcgatgaggacgtactgcgctaccagttcgtgaagaagaagggc
tacgtgcgcctgcacaccaacaagggcgacctcaacctcgagctgcactgcgacctgaca
ccgaagacctgtgagaacttcatcaagctgtgcaagaagcagtactacgacggcaccatc
ttccacaggtccatccgcaactttgtgatccaagggggcgaccccactggcacaggcaca
ggtggggagtcatactgggggaagcccttcaaagatgagttccggcccaacctctcgcac
acgggccgtggagtcctcagcatggccaactcggggcccaacagcaacaagtcccagttc
ttcatcaccttccgctcctgtgcttacctggacaagaagcacaccatctttggacgggtg
gttgggggcttcgacacactgacagccatggagaacgtggagagtgaccccaaaactgac
cgccccaagacggacattcgcattgaggccaccactgtgttcgtggacccctacgaggag
gccgatgcccagatcgctgaggagcgcaagaaaacacagctggatgaggagcctgaagcc
aaagccaagaccccgcagtctcagcctgggagccagggcccccagacgtaccgccaggga
gtgggcaagtacatcaacccagctgccacgagacgtgcggctgaggagccgtccaccagc
accgcggccccagcagccaagaggaagcctggccggggctttggggacttcagctcctgg
tag
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integrated database retrieval system
