Ochotona princeps (American pika): 101535558
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Entry
101535558 CDS
T07609
Symbol
WDTC1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101535558 (WDTC1)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101535558 (WDTC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML_2
EIF3I
Beta-prop_WDR3_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
TPR_19
TPR_1
TPR_2
TPR_17
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
TPR_11
Beta-prop_HPS5
Beta-prop_WDR41
TPR_16
Beta-prop_Aladin
ANAPC3
Beta-prop_EIPR1
TPR_14
Beta-prop_WDR35_TULP_N
TPR_6
TPR_BSK1_C
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Barstar
Motif
Other DBs
NCBI-GeneID:
101535558
NCBI-ProteinID:
XP_004592258
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Position
13:complement(1251952..1305596)
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AA seq
676 aa
AA seq
DB search
MAKVNITRDLIRRQVKERGALSFERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGD
LLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHD
LTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEY
CGQLVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQK
PLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTYK
QRPYTFLLPRKCHSSGEVQNGKMSTNGVSNGVSNGLHLHSNGFRLPESRGNVSPQVELPP
YLERVKQQANEAFACQQWTQAIQLYSKAVQRAPHNAMLYGNRAAAYMKRKWDGDHYDALR
DCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALGRDIT
AALFSKNDGEEKKGAGGGPVRLRSSSRKDSISEDEMVLRERSYDYQFRYCGHCNTTTDIK
EANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGID
PVVRLWNPRPESEDLTGRVVEDMEGASQANQRRMNADPLEVMLLNMGYRITGLSSGGAGA
SDDEDSSEGQVQCRPS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtcaacataactagagacctcatccgcaggcaggtcaaggagcggggtgcc
ctgagctttgagcggcgctaccacgtcactgaccccttcatccgacggctgggtctggaa
gcagagctgcagggtcactcaggctgtgtcaactgtctggaatggaatgagaaaggagac
ctgctggcctccggctctgatgaccagcacaccattgtgtgggacccactgcaccacaag
aagctgctctccatgcacacgggacacacggctaacatcttctctgtcaagttcctgcct
catgctggggaccgcatcttgatcacaggggcagctgactccaaagtgcatgtccatgac
ctgactgtaaaggagaccatccacatgtttggagaccacacaaaccgggtgaaacgcatt
gccacggcccccatgtggcccaacacattctggagtgccgctgaggatggactcatccgc
cagtatgaccttcgggagaacagcaaacactcagaggtgctcattgacctgaccgagtac
tgcggccagctggtagaggccaagtgcctcacggtcaacccccaggacaacaactgcctt
gctgtcggggccagcgggcccttcgtgaggctctacgacatccgcatgatccataaccac
agaaagagcatgaagcagagcccctcagcgggcgtgcacaccttctgtgaccgacagaag
ccccttccggatggtgcggcccagtattacgtggcaggtcatctgccagtgaaactgccc
gactacaacaaccgtctgagagtactggtcgccacctatgtgaccttcagccccaacggc
acagagctgctagtcaacatgggcggggagcaggtctatttgtttgacttgacttacaag
cagcggccatacaccttcctcttgcccagaaaatgccactcctcaggagaagttcagaat
ggcaagatgtccaccaatggagtgtccaatggtgtgtccaacggcctgcaccttcacagt
aatggcttccggttgccggagagtagaggaaatgtcagcccccaagtagaactgcctcct
tatctggagcgagtgaagcaacaggccaatgaggcatttgcctgtcagcaatggacccag
gccattcagctctacagcaaggctgtgcaaagggctccccacaacgccatgctctacgga
aaccgagctgccgcctacatgaaacgcaagtgggatggtgaccattacgatgccctgagg
gactgcctcaaggccatctccctaaacccatgccacctgaaggcacacttccgcctggcc
cgctgtctctttgagctcaagtatgtggccgaggccctggagtgcctggatgacttcaaa
gggaagttcccagaacaggcccatagcagcgcttgtgatgccttgggccgtgacatcacg
gctgccctcttctccaagaatgatggtgaggaaaagaagggagctggtggcggccccgtc
cgcctccgcagctcaagccgcaaggactccatctccgaggatgagatggtgctgagggag
agaagctatgactaccagttccgctactgtggccactgcaacaccaccacggacatcaag
gaggccaatttctttggcagtaatgctcagtacatcgtcagtggctctgatgacggctcc
ttcttcatctgggaaaaggagaccaccaatctagtccgcgtgctccagggggatgagtcc
attgtcaactgcctgcagccacacccgagctactgcttcctggccaccagcggcatcgac
cctgttgtccggctctggaacccccgaccagagagcgaagacctcacgggccgcgtagtg
gaggacatggagggcgcctctcaggccaaccagcggcgcatgaatgcagaccctctggag
gtgatgctgctcaacatgggctaccggatcacgggcctcagcagtgggggtgctggggcc
tctgacgacgaggacagctcagagggccaggtgcagtgccggcccagctag
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