Ochotona princeps (American pika): 101535588
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Entry
101535588 CDS
T07609
Symbol
RBBP5
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X1
KO
K14961
COMPASS component SWD1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
101535588 (RBBP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101535588 (RBBP5)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
101535588 (RBBP5)
COMPASS/SET1 complex (yeast)
101535588 (RBBP5)
MLL-HCF complex
101535588 (RBBP5)
MLL3/MLL4 complex
101535588 (RBBP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
WDR54
Beta-prop_LRRK2
Beta-prop_WDR75_1st
Beta-prop_WDR11_1st
Beta-prop_Vps41
Beta-prop_TEP1_C
BUD22
Motif
Other DBs
NCBI-GeneID:
101535588
NCBI-ProteinID:
XP_004578774
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Position
16:complement(16467039..16497185)
Genome browser
AA seq
538 aa
AA seq
DB search
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
IISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQ
NKVLVCPMKSAPVMLTLSDSTHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKT
DSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPE
PMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLD
VAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKS
EPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPPP
DAVQTSLMDEGASSEKKRQSSADGSQPPKKKPKTTNIELQGVPNDEVHPLLGVKGDGKSK
KKQAGRPKGSKGKEKDSPFKPKLYKGDRGLPLEGSAKGQVQVELSQPLTAGGAISELL
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgagctgctcgagtcctttgggcagaactacccagaggaagctgatggaact
ttggattgtatcagcatggccctcacttgtacctttaatagatggggcacgctacttgcc
gttggttgtaatgatggccgaattgtcatttgggatttcttgacaagaggcattgcaaaa
ataattagtgcacacatccatccagtctgttctctatgctggagccgagatggtcataag
ctcgtgagtgcttccactgataatatagtgtcacagtgggatgttctttcaggcgactgc
gaccagaggtttcgattcccttcgcccatcttgaaagtccagtatcatccacgagatcag
aacaaggttctcgtgtgccccatgaaatctgctcctgtcatgttgaccctttcagattct
acacacgttgttctgccggtagacgatgactccgatttgaatgtggtggcatctttcgat
aggcgaggggaatatatctacacaggaaatgccaaaggcaagattttggtcctaaaaaca
gattctcaggatcttgttgcttccttcagagtaacaactggaacaagcaatactacagcc
ataaagtcaattgagtttgcccggaaggggagttgcttcttgattaacacagcagataga
ataatcagagtttatgatggcagagaaatcttaacctgtggaagagatggggagcctgaa
cccatgcagaaattgcaggacttggtgaacaggaccccgtggaagaagtgttgcttctct
ggtgacggggaatacatagtggcaggttctgcccggcagcatgctctgtacatctgggag
aagagcattggcaacctggtgaaaattctccacgggacgagaggagagcttctcctggac
gtggcttggcatcctgtgcgacccatcatagcatccatttctagtggagtcgtctctatt
tgggcacaaaatcaagttgaaaattggagtgccttcgcaccagatttcaaagagttggac
gaaaatgtagagtacgaagaaagggaatcagagtttgatattgaagatgaagataagagt
gagcctgaacagacaggtgctgatgctgcagaagatgaggaagtggatgtcaccagtgtg
gaccccatagctgccttctgcagcagtgatgaagagctggaagattcaaaggctctgttg
tatttacccattgcccctgaggtagaagacccagaggaaaatccctatggccccccaccg
gatgcagtccaaacctccttgatggatgaaggggctagttcagagaagaagcggcagtcc
tcagctgatggatcccagccgcccaagaagaaacccaaaacaaccaacatcgaacttcaa
ggagtcccaaatgatgaagtccatccactactgggtgtgaagggggatggcaaatccaag
aagaagcaagcaggccggcctaaaggatcaaaaggtaaagagaaagattctccatttaaa
ccgaaactctacaaaggggacagagggttacctctggaaggatcagcgaagggtcaagtg
caggtggagctcagccagcctttgacagcaggaggagcaatctcagaactgttatga
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integrated database retrieval system