Ochotona princeps (American pika): 101535610
Help
Entry
101535610 CDS
T07609
Symbol
SEMA6A
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101535610 (SEMA6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
DUF3481
Motif
Other DBs
NCBI-GeneID:
101535610
NCBI-ProteinID:
XP_004586411
LinkDB
All DBs
Position
3A:49376872..49418213
Genome browser
AA seq
1035 aa
AA seq
DB search
MRLEALLLCFTLLHLAGAGFPEDSEPISISHGNYTKQYPVFVGHKPGRNSTQRHKLDIQM
VMVLNRTLYIAARDHIYTVDIDTSHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLRKNDDTLFVCGTNAFNPSCRNYKMDTLEPFGDEFSGMARCPYDAKHANVALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDHGDYIYFFFREMA
VEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVT
DVIRIHGRDVVLATFSTPYNSIPGSAVCAYDMVDIANVFTGRFKEQKSPDSTWTPVPDER
VPKPRPGCCAGSSSLEKYTTSSEFPDDTLNFIKTHPLMDEAVPSIINRPWFLRTMVRYRL
TKIAVDTAAGPYQNYTVVFLGSEKGIILKFLARLGSNGFLNHSVFLEEMSVYNSEKCSYD
GVEDRRIMGMQLDRASSSLYVAFSTCVIKVPLGRCERHGKCKKTCIASRDPYCGWVKEGN
SCAHLSPSSRLAFEQDIERGNTDGLGDCHNSFVALNDMSTPLPDHDMSYNTVYGRSGSAL
PSSTTADAAARGGHESRAGLPDWTELLHPPGSTDPLGPVSSHNHQDKKGVIRESYLKGHD
QLVPVTLLAIAVILAFVMGAVFSGIVVYCVCDHRRKDAGSAQRKDKELPHSRRGSMSSVT
KLSGLFGDSQAKDPKPEAVLTPLMHNGKLATPGGTAKVLIKADQHHLDLTALPTPESTPT
LQQKRKPSRGSREWERSQNLINACTKDMAPLGSPVIPTDLPLRASPSHIPSVVVLPITSQ
QGYQHEYVEQPKLSEVAQMALEEQGATLEYKTIKEHLSCKSPSHAVSLVEHLDGLPPKVP
QREASLGPQNGLSKRLEMHPSSSYGLDYKRSYPTNSLTRSHQATALKRNNTNSSNSSHLS
RNPSFGRGDNPPPAPQRVDSIQAQPGTVARQPSLSGYSSLSRPGLKRTPSLKPDVPPKPS
LAPLTAPMKPGDTCT
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgaggttagaagccctgctgctctgtttcacactgctgcacttggcgggcgccggcttc
ccagaagactctgagccaatcagtatctcgcatggcaactatacaaaacagtacccggtg
tttgtgggccacaagccaggacggaacagcacacagagacacaaactggacatccagatg
gtcatggtcttgaacagaaccctctacattgctgccagggaccatatttatactgttgat
atagacacgtcacacacagaagaaatttactgtagcaaaaaactgacatggaaatctaga
caggctgatgtcgacacgtgcagaatgaaggggaaacataaggacgagtgtcacaacttt
atcaaagtcctgctgcggaagaacgatgacacgctgttcgtgtgtgggacaaacgccttc
aacccttcctgcagaaactacaagatggacaccttggaaccattcggggatgaatttagt
gggatggcccggtgtccatatgatgcgaagcatgccaacgtcgccctgttcgcagatggg
aaactgtactcggccactgtgacggacttcctcgctattgacgcagtcatctaccggagc
ctgggagacagccccaccctgcggaccgtcaaacatgattccaaatggctaaaagaaccc
tactttgtgcaagcggtggaccacggcgactacatctacttcttcttcagggagatggct
gtggagtacaacaccatgggcaaggtggtgttccccagagtggcgcaggtgtgcaagaac
gacatgggtggctcacagcgggtgctggagaagcagtggacctccttcctcaaggcccgt
ctcaactgctccgtgcccggcgactcgcacttctacttcaacatcctgcaggccgtcacc
gacgtgatccgcatccatggccgtgatgtcgtcctggcaaccttctcgacgccttacaac
agtatccccggctctgctgtctgtgcctacgacatggtggacatcgccaatgtcttcact
gggcgattcaaggaacagaagtcccctgactccacctggacgccggttcctgatgagcga
gttcccaagcccaggcccggctgctgtgcaggctcatcctccctagagaaatacaccacg
tccagcgagttcccggatgacaccttgaatttcatcaagacacacccactcatggatgaa
gcagtgccctccatcatcaaccggccttggttcctgaggacgatggtcagataccgcctg
accaaaatcgccgtggacaccgcagcggggccctaccagaactacaccgtggtgttcctg
gggtcggagaaggggatcatcttgaagttcttggccaggctgggcagcaatggcttcctc
aatcacagcgtcttcttggaggagatgagtgtctacaattctgagaagtgcagctacgat
ggcgtggaggaccggcggatcatgggcatgcagctggaccgcgcgagcagctctctatat
gtggcgttctccacctgcgtgatcaaggtccccctgggccgatgcgaacggcatggcaag
tgcaagaaaacctgcatcgcctctagagatccctactgtgggtgggtgaaggaaggcaac
tcctgtgcccacctgtcacccagcagcaggttggcatttgagcaggacatagagcgtggc
aacacggacggcctgggagactgtcacaattccttcgtggctctgaatgacatgtcaact
cctctaccagatcatgatatgtcttacaacacagtgtatgggcgctccggctccgccttg
cccagcagcaccacggcagacgcggcggctcgagggggccatgagtcccgggcagggctg
cccgactggacagagctgctccacccacctggcagcacagaccctttggggccagtgtct
tcccataaccaccaagacaagaagggagtgattcgcgagagttacctcaaaggccacgac
cagctggttcccgtgacccttctggccatcgctgtcatcttggcgttcgtcatgggggcc
gtgttctcgggcatcgtcgtctactgcgtgtgcgaccaccggcgcaaggatgcgggctcg
gcgcagcgcaaggacaaggagctcccgcactcccgccggggctccatgagcagcgtcacc
aagctcagcggcctcttcggggactcgcaggccaaagacccgaagcccgaagccgtcctc
acgccactcatgcacaacggcaagctggccacacccggcggcacggccaaggtgctcatc
aaggctgaccagcaccacctggacctcacggccttgcccacgccagagtccacacccacg
ctgcagcagaagcggaagccaagccggggcagccgggagtgggagcggagccagaacctc
atcaacgcctgcaccaaggacatggcgcccctgggctcgcccgtgatccccacggacctg
ccgctgcgggcctcacccagccacatccccagcgtggtggttctgcccatcacctcgcag
cagggctaccagcacgagtacgtggagcagcccaagctgagcgaggtggcccagatggcg
ctggaggagcagggcgccactctcgagtacaagaccatcaaggagcacttgagctgcaag
agccccagccacgcggtcagcctggtggagcacctagatggcctgccccctaaagtcccg
cagcgtgaggcctcgctggggccccagaacggcctgagcaagcgactggaaatgcacccc
tcctcctcctacggcctggactataagaggagctaccccacgaactcgctcacccgcagc
caccaggccaccgccctgaaaaggaacaataccaactcctccaactcctcccacctctcc
cgcaaccccagcttcggccggggggacaacccaccgcccgccccgcagagggtggactcc
atccaggcccagcctgggaccgtggccaggcaaccgagcctcagcggctacagctccctg
agcaggccggggctgaagcgcacgccctcgctgaagcccgacgtgccgcccaagccctcc
ctagcacccctcaccgcacccatgaagccgggcgacacgtgtacataa
DBGET
integrated database retrieval system
