Ochotona princeps (American pika): 101535643
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Entry
101535643 CDS
T07609
Symbol
RERE
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101535643 (RERE)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
101535643 (RERE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
BAH
ELM2
GATA
Myb_DNA-binding
DUF7952
DUF7573
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
101535643
NCBI-ProteinID:
XP_004596131
LinkDB
All DBs
Position
13:17534377..17845386
Genome browser
AA seq
1547 aa
AA seq
DB search
MTADKDKDKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEGGAKNYAESDHSEDED
NDNSATTEESTKKNKKKPPKKKSRYERTDTGEITSYITEDDVVYRPGDCVYIESRRPNTP
YFICSIQDFKLVHNSQACCRSPTPALCDPPACSLPVAPQPPQQLSEAGRGPVGSKRDHLL
MNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVITDPVIKNRELFISDYVDTYHAAAL
RGKCNISHFSDIFAAREFKARVDSFFYILGYNPETRRLNSTQGEIRVGPSHQAKLPDLQP
FPSPDGDTVTQHEELVWMPGVNDCDLLMYLRAARSMAAFAGMCDGGSTEDGCVAASRDDT
TLNALNTLHESGYDAGKALQRLVKKPVPKLIEKGWTEEEVKRFVKGLRQYGKNFFRIRKE
LLPNKETGELITFYYYWKKTPEAASSRAHRRHRRQAVFRRIKTRTASTPVSTPSRPPSSE
FLDLSSASEDDFDSEDSEQELKGYACRHCFTTTSKDWHHGGRENVLLCTDCRIHFKKYGE
LPPVEKPVDPPPFMFKPVKEEEDGLSGKHSMRTRRSRGSMSTLRSGRKKQPASPDGRTSP
INEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSTKRQRDKVASDTEES
DRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDN
ESDSDSSAQQQLLQAQPPALQAPGGAPTTPSAAQAGASQLPTPGPTASATAPPAQGSPAA
VPPPSQPPAPVAPAAHSHIQQAPALHPPRLPSPHPPTGQAPAPTHSQPALHGQGPHGLQA
GPILQHPGPPQPFGLPPQTSQGQAALGASPATAHPHGTLQLPATQATLQAQQPPREQPLP
PAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHH
PPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLTPAAASHPPASLHQVPPQPPFAQHSF
VPGGPPSITPPTCPSTSTPPAGPSSSAQPPCSAAVSSGGGIPGGASCPLPAVQIKEEIRD
DAEEPESPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSKL
AKKREEAVEKAKREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSE
PQLTGPGHMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARPHVMSPTNRNHPFYMPLN
PTDPLLAYHMPGLYNVDPTIRERELREREIREREIRERELRERMKPGFEVKPPELDPLHP
ATNPMEHFARHSALTIPPAAGPHPFASFHPGLNPLERERLALAGPQLRPEMSYPDRLAAE
RIHAERMASLTSDPLARLQMFNVTPHHHQHSHIHSHLHLHQQDPLHQGSAGPVHPLVDPL
TAGPHLARFPYPPGTLPNPLLGQPPHEHEMLRHPVFGTPYPRDLPGAIPPPMSAAHQLQA
MHAQSAELQRLAMEQQWLHGHPHMHGGHLPSQEDYYSRLKKEGDKQL
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgacaaagacaaagacaaagacaaagagaaggaccgggaccgggacagggac
cgggagagagagaaaagggacaaagcccgagagagcgagaattcgaggccccgccggagc
tgcaccttggaaggaggggccaaaaattacgctgagagtgatcacagtgaagacgaggac
aatgacaacagtgccaccacggaagagtccaccaagaagaacaagaagaaaccaccgaaa
aaaaagtctcgctacgaaaggacagacactggcgagataacgtcctacatcaccgaggat
gacgttgtctaccggccaggagactgtgtgtatattgagagtcggagaccaaacacaccg
tatttcatctgtagcatccaagacttcaaactggtccacaactcccaggcctgttgcaga
tctccaactcctgctttgtgcgaccccccagcatgctctctgccggtggcaccacagcca
ccacagcaactttctgaagccgggagagggcctgtagggagtaagagggaccatctgctc
atgaacgtcaaatggtactaccgtcagtctgaagttccagattctgtgtatcaacatttg
gttcaggatcgacataatgaaaatgactctggaagagaacttgtcatcacagaccctgtt
atcaagaaccgggagctcttcatttctgattatgtcgacacgtaccatgctgctgcactg
agagggaagtgcaacatctcccacttttctgacatttttgctgcgagagagtttaaagct
cgagtggattcgttcttctacatcctgggctacaaccctgagaccaggaggctgaacagt
acccagggagagattcgtgttggtcctagccatcaggccaaacttccagatttgcagcca
tttccttctccggatggcgatactgtgacccagcatgaagaactcgtctggatgcctgga
gtgaacgactgtgaccttctcatgtacctgcgggcggccaggagcatggccgcctttgcc
gggatgtgtgatggaggctccacggaagatggctgtgtcgctgcgtctcgggatgacacc
acactgaatgcactcaacacactccatgaaagcggttacgatgctggcaaggccctgcag
cgcctggtgaagaagccggtgcccaagctgatcgagaagggctggactgaggaagaagtg
aaacgcttcgtgaagggcctcaggcagtacggcaagaacttcttcagaatcaggaaggag
ctgcttcccaataaggaaacgggggagctgatcaccttctattactactggaagaaaacg
cccgaagcggccagctcgcgggcccaccgtcgtcaccggaggcaggctgtgttcaggcgc
atcaagacccgcactgcatccactcctgtcagcacgccctccaggcctccctccagtgaa
ttcttggacctgagttctgccagcgaggatgactttgacagtgaggacagcgagcaggag
ctgaagggttacgcctgccgccactgcttcaccaccacctccaaagactggcaccacgga
ggccgggagaacgtcctgctgtgcaccgactgccgcatccacttcaagaagtacggcgag
ctcccgcccgtcgagaagcccgtggacccgccgcccttcatgttcaagcccgtcaaggag
gaggaggatgggctcagcgggaagcatagcatgaggacgcggcggagtcggggctcgatg
tctacactacgcagtggtcgcaagaagcagccagccagccctgacggtcgcacctcgccc
atcaatgaagacatccgctccagtggccgcaattcccccagcgccgccagcacctccagc
aatgacagcaaagcggaaacagtgaagaagtctgccaagaaggtgaaggaggaagcctca
tccccgctgaagagcaccaagcgacagcgcgacaaggtggcctccgacacggaggagtcg
gacaggaccagctccaagaagaccaaaacccaggagatcagccggcccaactccccatcg
gaaggtgaaggcgagagttcagacagccgcagtgtcaacgatgagggaagcagtgacccc
aaagacattgaccaggacaatcgcagcacgtcccccagcatccccagcccccaggacaac
gagagtgactcggactcatctgcccagcaacagctgctgcaggcccagcccccagccctg
caggcccccgggggggctcctaccaccccctcagcagcacaggccggagcatcccagctc
cctaccccgggccctacagcctctgccactgcaccccctgcgcagggctcccctgcagcc
gtgccgcctcctagccagcctccagccccggtagcacctgctgcacactcgcacatccag
caggctcctgccctgcaccctccacggctgccctcgccacaccctccaactggccaggca
cccgctcccactcacagccagcccgccctgcacggccagggcccacatggcctacaggcc
ggtcccatactgcagcacccagggcccccccagccctttggccttcctcctcagacctcc
caaggccaggctgccctgggcgcctccccagccaccgcacaccctcacggcaccttgcag
ctcccagccacccaggcaacattgcaggcgcagcagcccccgagggagcagcccttacca
ccagcaccattggccatgccacatatcaagcccccacccaccacgcccatcccccagctg
ccagcacctcaggcccacaagcaccctcctcacctctcggggccatcgcccttctccatg
aacgccaacctgccaccccctccagccctgaagcccctgagctccctgtccacacaccac
ccgccgtcagctcacccccctcccctgcagctcatgccccagagccagcctttgccctcc
tctcctgcccagccccctgggctgacccagagccagaacctgactcctgctgctgcctcc
caccccccagccagcctccaccaggtgcccccccagcccccatttgctcagcactccttt
gtacctggaggcccaccctccatcacccctcccacctgcccctccacctccaccccacct
gcagggcccagcagctcagcccagccgccttgctctgccgctgtctcttcgggaggtggc
attccagggggggcctcctgcccgctccccgctgtgcagatcaaggaagagattcgcgat
gatgctgaggagcccgagagccccccgccccctccgaggagcccatcccctgagcccaca
gttgtggacacccccagccatgccagccagtctgccaggttctacaaacacctggaccgg
ggctacaactcctgtgcacggacagacctgtacttcatgcctctggctggctccaaactg
gccaagaagagggaggaggccgtcgagaaggccaagcgggaggctgagcagaaggcccgg
gaggagcgcgagcgggagaaagagaaggagaaggaacgcgagcgcgagcgggagcgggag
cgagaggccgagcgtgcagctaaggcgtccagctcagcacacgaaggccgccttagtgag
ccgcagctcacagggccgggccacatgcggccatccttcgagccaccgccaacgaccatt
gctgctgtgcccccctacattgggcctgacacgcctgccctccggaccctgagcgagtac
gctcgaccccatgtcatgtcacccaccaaccgcaaccaccccttctacatgcccctcaac
cccactgaccccctgctggcttaccacatgcccggcctctacaacgtggaccccacgatc
cgcgaacgggagctgcgggagcgggagatccgcgagcgcgagattcgtgagcgggagctg
cgggagaggatgaagccgggcttcgaggtgaagcccccggagctggaccccctgcacccg
gccaccaaccccatggagcacttcgcccggcacagcgccctcaccatcccccctgcggct
ggcccacacccatttgcatctttccaccctggtctgaaccctttggagcgtgagagactg
gccttggcgggcccccagctgcgacctgagatgagctaccccgacagactcgcggctgag
cgcatccacgctgagcgcatggcgtctctgaccagcgaccccctggcccgactgcagatg
ttcaatgtgaccccacaccatcaccagcactcacacatccactctcacctccacctccac
cagcaggaccctctccaccaaggatcagcaggtccagttcacccactggtcgaccccttg
actgctggccctcacttggcccgcttcccctacccgcctggcactctccccaaccctctg
cttggacagccaccccacgagcacgagatgctgcgtcacccagtgtttggcaccccctac
ccccgagacttgcctggggccatcccaccccccatgtcggccgcccaccagctgcaggcc
atgcatgcccagtccgcggagctgcagagactggccatggagcagcagtggctgcatgga
cacccccacatgcacggtggccacctcccgagtcaggaggattattacagccgactgaag
aaagaaggtgacaagcagttgtaa
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