Ochotona princeps (American pika): 101535648
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Entry
101535648 CDS
T07609
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101535648 (NPAS1)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101535648 (NPAS1)
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_4
HLH
PAS_9
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
101535648
NCBI-ProteinID:
XP_004597095
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Position
5:complement(3496617..3505756)
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AA seq
594 aa
AA seq
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MSTPYSSRGSVVEGRCGGGRGASIPWDFLPGLMVKAPPGPCLQAQRKEKSRNAARSRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRSVAPPGSLA
PGRRGPAALASEVFEQQLGGHILQSLDGFVFALNQDGKFLYISETVSIYLGLSQVELTGS
SVFDYIHPGDHSEVLEQLGLRAPTPGPPTPPSVSSSSSSSSSLADAPETEPSPAEAAPSS
RAQERSFFVRMKSTLTKRGLHVKASGYKVIHVTGRLRARALGLVALGHTLPPAPLSELPL
HGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDVTRIRQSHLELLDK
GQVVTGYYRWLQRAGGFVWLQSVATVAGSGKSPGEHHVLWVSHVLSQAEGDQAPLDAFQL
PATHEDMSSPGPEPTGEPHPTSARETHPAPQDKEEAPQSQSKCIKTEESPKEVTTGSEDS
GDEEAAGSPALLPRPEFTSVIRAGALKQVPMRPWGLAPPGDPAPALLHAGFLPPPMMRSL
CAPGAIRYGPAELGLMYPHLQRLGPGPGLPEAFYPTLGLPYPGPATARLQRKGD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccccctattccagccgtggcagcgtggtcgagggcagatgcgggggaggccgt
ggcgccagcatcccgtgggactttctgcctgggctgatggtcaaggccccgcccggaccc
tgcctgcaggcgcagcgcaaggaaaagtcgcgcaatgctgcgcgctccaggcgcgggaag
gaaaacctggagtttttcgagctggccaagttgctcccgttgcccggcgccatctccagc
cagctggacaaggcgtccatcgtgcgcctcagcgtcacctacctccgcctgcggcgcttt
gccgccctgggggcgccgccctgggggctgcggtccgtagcgccaccgggcagcctggcc
ccaggccgccggggccctgccgcgctggcctcggaagtcttcgagcagcagctgggagga
cacatcctacagtccttggacggcttcgtgttcgccttgaaccaggatgggaaattcctg
tacatttcagaaacagtgtccatctatctgggcctgtcacaggtggagctgaccggcagc
agcgtcttcgactacatccacccaggcgaccactcggaggtgctggagcagctggggctg
cgcgccccgacgcctgggcctcccactcccccctctgtctcctcttcctcctcgtcttcc
tcctcgctggccgacgcgccagagaccgagcccagccccgcggaggcggccccctccagc
cgcgcgcaggagcgctccttcttcgtccgcatgaagtccactctcaccaagagggggcta
cacgtcaaggcctcggggtacaaggtcatccacgtgacggggcgcctccgggcacgcgcc
ctgggcctggtggccctcggccacacgttgccccccgcaccgctgtccgagctccccctg
catggacacatgatcgtcttccgcctcagcctgggcctcaccatccttgcctgtgagagc
agagtcagcgaccacatggacctggggccttcagagctggtgggccgtagctgctaccag
ttcgtgcacggccaggacgtgacgaggatccgccaaagccacctggagctgctggacaag
ggccaggtggtgaccggctactaccgctggctgcagcgtgctgggggctttgtgtggctg
cagtcagtggccactgtggccgggagtggcaagagccccggggagcaccacgtgctatgg
gtcagccacgtgctcagccaagcggagggtgaccaagcccccctggacgccttccagctt
ccggccacccacgaggacatgtccagcccagggccagagcccacaggtgagccccatccc
acctcagccagggaaacccacccggctccccaagacaaagaggaggccccccagtcccag
agcaaatgcatcaagacggaggaaagccccaaggaggtgaccacggggtccgaggacagt
ggagatgaggaggccgcgggcagccccgccctgctgccgcgccccgagttcacatccgtc
atccgtgcaggggccctgaagcaggtccccatgcggccctggggcttggctccaccaggg
gacccagcacctgccctcctgcacgcgggcttcctgccaccgcccatgatgcggagtctg
tgcgcgcccggcgccatccgctacggccccgcagagctggggctcatgtacccgcatctg
cagcggctgggcccggggcctgggctcccggaagctttctacccgaccctgggcctgcca
tacccagggcccgcgactgccaggctgcagcggaagggggactga
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