Ochotona princeps (American pika): 101535649
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Entry
101535649 CDS
T07609
Symbol
TSEN34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
opi03016
]
101535649 (TSEN34)
Enzymes [BR:
opi01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
101535649 (TSEN34)
Transfer RNA biogenesis [BR:
opi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
101535649 (TSEN34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
101535649
NCBI-ProteinID:
XP_004597169
LinkDB
All DBs
Position
5:complement(552574..557690)
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AA seq
339 aa
AA seq
DB search
MTRLIQGSPWVGRERTDPARETGPPDLGLGRRAGTPKPGGAGGGVGGARAAEETDVENTR
TPTRARSAEPRTPERRLVRVRRSREHPNADSCAFGGSENTRTPTRARSGGAGTALASFKR
QQEQSFQEQSALAVEAREAQRQELREKIAQGQAAKKQRLEQAAGTGGAQEAAGSQAGPEQ
AQEGQAAGEQEEASPSQPGPSDELAPLPRSALLVQLATARPRPVKARPLDWRVQSKDWPH
AGRPAHELRYSIYRDLWERGFFLSAAGKFGGDFLVYPGDPLRFHAHYIAQCWAPEDPIPL
QDLVAAGRLGTSVRKTLLLGSPQPDGTVVYTSLQWAGLQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcttgatccaggggtcgccatgggtgggccgcgagcggaccgaccccgcccga
gagacaggaccgcctgatttggggctcggtcgtagggcgggaacccctaaaccaggtggc
gcgggcggcggagtgggcggggcccgggctgcagaagagacggacgtcgagaacacgcga
acgccgactcgtgcgcgttcggcggagccgagaacacccgaacgccgactcgtgcgcgtt
cggcggagccgagaacacccgaacgccgactcgtgcgcgttcggcggatccgagaacacc
cgaacgccgactcgtgcacgttcgggaggggcggggactgctctggcatccttcaagcgc
cagcaggagcagagcttccaggagcaaagcgccctggcagtggaggcccgcgaggcccag
cggcaggagctccgggagaagatcgcccagggccaggccgccaagaagcagaggctggag
caggctgcggggaccggcggggcccaggaggccgcgggcagccaggctggccccgagcag
gcccaggagggccaggctgccggggagcaggaggaagcatccccctcccagcccgggcct
tcggatgagctggcccccttgcccaggtcggcgctgctcgtgcagctggccactgccagg
ccccggcccgtcaaggctcggccactagactggcgtgtgcagtccaaggactggccgcac
gccggccggccggcccacgaactgcgctacagcatctacagggacctgtgggagcgtggc
ttcttcctcagtgcggccggcaagttcggcggtgacttcctggtgtacccaggtgacccg
ctgcgtttccacgcccactacattgcccagtgctgggcccctgaggaccccatcccgctg
caggacctggtggctgccggccgcctggggaccagtgtccggaagaccctcctgctgggc
tccccgcagcctgatggcacggtggtctacacatccctgcagtgggcaggcctgcagtga
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