Ochotona princeps (American pika): 101535889
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Entry
101535889 CDS
T07609
Symbol
MSR1
Name
(RefSeq) macrophage scavenger receptor types I and II isoform X1
KO
K06558
macrophage scavenger receptor 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101535889 (MSR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101535889 (MSR1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
opi04090
]
101535889 (MSR1)
Membrane trafficking [BR:
opi04131
]
Endocytosis
Phagocytosis
Scavenger receptors
101535889 (MSR1)
CD molecules [BR:
opi04090
]
Proteins
101535889 (MSR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
Macscav_rec
Collagen
SRCR_2
THOC7
Baculo_PEP_C
IMEF_Flp
Motif
Other DBs
NCBI-GeneID:
101535889
NCBI-ProteinID:
XP_004597893
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Position
2A:56571864..56623210
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AA seq
454 aa
AA seq
DB search
MARWNSFTDQQEDIDSYSESVKFDARAMTTLLPPNPKNGPPIQEKLKSFKAALIALYLLV
FAILIPVIAIVAAQLLKWEMKNCTVGSINANGISSSLMGKGNDSEDEMKFQQIVMEHINN
MERRIQYISDTEENLIDLEHFQNFSATTDQRLNDVLFQLSTLVSSVQGHGKAIDEISSSL
TNLNMTLLNLHLYTETLNGKIQEIALEEQEEISKLKERVHNASAEIMSMKQEQARLEQEI
KGEVKVLNNITNDLRLKDWEHSQTLRNITLIQGPPGPPGEKGDRGPIGQSGPPGVPGPVG
PPGLKGDRGAVGFPGSRGYPGQSGKTGRTGNPGQKGQKGEKGSGSVQTPNKTVRLIGGNG
PHEGRVEILHNGQWGTICDDHWELRAANVVCRSLGYPGVKSVHKESYFGRGTGPIWLNEM
LCLGRESSIEECAIRQWGVRVCSHIEDAGVTCTL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggtggaacagtttcactgatcagcaggaggacattgatagctattctgaatct
gtgaagtttgatgctcgtgccatgacaaccttgcttcctccaaatcctaaaaatggtcct
ccaattcaagaaaaactgaaatccttcaaagctgcactgattgccctgtatctcctggtg
tttgcgattctcatacccgtgattgccatagtggcagctcaactcctgaaatgggaaatg
aagaattgcacagttggttcaattaatgcaaatggtatctcttcaagtctcatgggaaaa
ggaaatgacagtgaagatgaaatgaaatttcaacaaattgttatggaacacattaacaac
atggagagaagaattcaatatatctcagatactgaagaaaatctcatagatttagagcat
tttcaaaatttcagtgcgacaactgatcaaaggcttaatgatgttcttttccaactaagt
accttggtttcctcagtccagggacatgggaaggcgatagatgaaatctccagttcctta
acaaatctgaatatgacactgcttaatttgcacctctacacagaaacactgaatggaaaa
atccaagagattgcacttgaagaacaagaggaaatcagcaaattaaaggagcgtgtgcac
aatgcatcagcagaaattatgtctatgaaacaagaacaagctcgtttggaacaggaaata
aaaggagaagtgaaagtactaaataacatcactaatgatctcagactgaaagattgggaa
cattcacagacattgagaaatatcactttaattcaaggccctcctggacccccaggtgaa
aaaggagacagaggcccaattggacaaagtggcccaccaggcgttccaggtccagtaggt
cccccaggcctgaaaggtgatcgaggagcggttggctttcctggaagtcgagggtatcca
ggacagtcagggaagactgggagaacaggaaatcctggacaaaaaggccagaagggggaa
aagggcagtggaagcgtccaaactccaaataagacagttcggctgattggtggcaacggc
cctcatgaggggagagtggagattttacacaatggccaatggggtacaatttgtgatgat
cactgggaattgcgtgctgcaaatgttgtctgcaggagtttgggatacccaggagttaaa
agtgtgcacaaggaatcttattttggacgaggcactggtccaatatggctcaatgaaatg
ctctgtttggggagagaatcatccattgaagagtgtgctatcagacagtggggtgtgaga
gtctgttcacatatcgaagatgctggagtcacttgcactttgtaa
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integrated database retrieval system
