Ochotona princeps (American pika): 101536107
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Entry
101536107 CDS
T07609
Symbol
PHF1
Name
(RefSeq) PHD finger protein 1 isoform X1
KO
K11467
PHD finger protein 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101536107 (PHF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101536107 (PHF1)
03036 Chromosome and associated proteins [BR:
opi03036
]
101536107 (PHF1)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
101536107 (PHF1)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
101536107 (PHF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
ASH2L-like_WH
PHD_2
Chromo
DUF4537
Motif
Other DBs
NCBI-GeneID:
101536107
NCBI-ProteinID:
XP_004590327
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All DBs
Position
12:31609019..31612723
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AA seq
579 aa
AA seq
DB search
MAQSPRLSRSSAPSLWDPASPAPTSGTRPRLWEGQDVLARWTDGLLYLGTIKKVDSTREV
CLVQFEDDSQFLVLWKDISPAALPGEELICCVCRSEAVAPGNRLVSCEKCRHAYHQDCHV
PRAPAPGEGDGTSWVCRQCIFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
LSNRQQSYCYCGGPGEWNLKMLQCQSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTFENWDSLLLGELSDTPKGE
RSSKLLSALNSHKDRFISGREIKKRKCLFGLHARIPPPVESPPGDGAPTSFPSGQGPGGG
VSRPLGKRRRLEPEPEPELEPEPEPPRKRPKGKVEELGPPSAVRQQPEMEILEQRERARM
QRALQASVSPPPSSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGEGE
PPDRSPLELHIGFPTDIPQSAPHSMTASSSSAPILPPGPPSHSAPPSTLCRGLSPGTGGG
GRGGVGYLSRGDPVRILARRILPDGSVQYLVEWGGGGIF
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtctccccggctgagccgctctagtgcgccctccctttgggacccagcttcc
cctgctcccacctcaggcaccaggcctcggctgtgggagggtcaagatgtactggccaga
tggaccgatgggctgctctacttgggcaccatcaagaaggtggacagcactcgggaggtg
tgtctggtccagtttgaggatgactcccagtttctggttctatggaaagacattagccct
gctgccctgcccggagaggaactcatctgctgcgtctgtcgatctgaagcagtggcccct
gggaaccggctggtcagctgtgagaagtgtcgccacgcttatcaccaggactgccatgtt
cccagggccccagcccctggtgagggagatggcacctcctgggtgtgccgccagtgcatc
tttgcaatcgccaccaagagaggaggtgcactgaagaagggcccctatgccagggccatg
ctgggcatgaagctgtcactgccctatggactcaaagggctggactgggatgccgggcac
ctgagcaaccgacagcagagctactgctactgcggtggccctggggagtggaacctgaag
atgctgcagtgtcagagctgcctgcaatggttccacgaggcctgcacccagtgtctgagc
aagcccctcctctatggggacaggttctatgaatttgaatgctgcgtgtgccgggggggc
cctgagaaagttcgaaggctacaactccgctgggttgacgtggcccatcttgtcctctac
cacctgagcgtctgctgtaagaagaaatactttgattttgaccgcgagatcctccccttc
acctttgagaactgggacagtttgctcctgggggagctttcagacactcccaagggagag
cgttcttctaagcttctctctgctcttaacagtcacaaggatcgtttcatttcaggacga
gagatcaaaaagagaaaatgtttatttggcctccatgctcgcatccctcctcctgtggag
tcccctcctggagatggagcgccaaccagcttcccttcagggcagggccctgggggaggg
gtctcacgtcccctggggaagcgtcggaggctggagccggagccggagccagagctggag
ccggagccagagcccccaagaaagagaccgaaggggaaagtggaggagctggggccaccc
tcagcagtgcgccagcagcccgagatggagatcctagagcagagagagcgggctcgtatg
cagagggcactgcaggcctctgtgtctccaccaccctccagccctaaccagagttaccag
ggcagcagcggctacaacttccggcccacagatgcccgctgcctgcccagcagccctatc
cggatgttcgcctccttccacccttctgccagcactgcagggacctctggggagggtgaa
cccccagacaggtcacccctggaacttcacattggtttccccacagacatccctcaaagt
gccccccactcgatgactgcctcatcttcctcagccccaatcctgcccccaggtcctcct
agccactcagcgcctccttcaaccctgtgccgtggcttgtctcctgggactgggggaggg
ggccgcggtggagttggctacctgtcccgaggggaccctgtacggatacttgctcggcgg
atactgcctgatggctccgtgcagtacctggtggagtggggcggaggaggcattttctga
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