Ochotona princeps (American pika): 101536186
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Entry
101536186 CDS
T07609
Symbol
ZC3H12D
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101536186 (ZC3H12D)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
101536186 (ZC3H12D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
zf-CCCH_2
zf-CCCH
zf-CCCH_4
UBA_N4BP1
Regnase_1_C
PRORP
Motif
Other DBs
NCBI-GeneID:
101536186
NCBI-ProteinID:
XP_004587410
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All DBs
Position
12:complement(137249943..137268355)
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AA seq
499 aa
AA seq
DB search
MDRSSKMEFFQKLGYSQEDVARVLGKLGDSALVNDVLQELIRTGSRPGTREPQTVPQLVP
RGSTGLPDSAPWGLGAAPEEDCADPASSLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVDW
FRERGHTYIKVFVPSWRKEPSRSDAPIREQHVLEQLERQAVLVYTPSRKVHGKRVVCYDD
RYIVKVAYEQDGIIVSNDNYRDLQSENPEWKWFIEQRLLMFSFVNDRFMPPDDPLGRHGP
TLCNFLSRKPRPPEPSWQHCPYGKKCTYGVKCKFYHPERPHHAQLAVADELRSKTRAWPG
GGAPAGRAATRPARPPAELAALQGSFSRLTFSDGPGPHGTRPPGAPPRLRWSDWVPQGGR
VPGPSPCPQAGSAAAPPQPPGLPSPQSAFAAGDLPPPPGSRLQPSGGHCAQDLPGDLWAH
PPSSDRFPSRSAWTEPAWGHRTCDCAEHARAQARSALCSLLPPEQVDSALAAFPGLSDLA
GLLLLLQRSPREGAQPGTP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaccgttcgagcaagatggagttcttccagaagctgggctacagccaggaggatgtg
gccagggttctgggcaagctgggtgacagtgctctggtcaacgacgtgcttcaggagctg
atccggacgggcagccgccctgggacccgggagccccagactgtgccccaacttgttccc
cggggctccactgggctcccagattctgctccatggggcttgggggcagctccagaagag
gactgtgcagacccagccagttccctgcgtcccatcgtgattgatggcagcaacgtggcg
atgagtcatggaaataaagaagtcttttcctgccgggggatccagctggctgtggactgg
ttcagggaaagaggacacacgtacatcaaggtttttgtcccatcctggaggaaggagcca
tcaagatctgacgcccccatccgagagcagcacgtgctggagcagctggagcggcaggct
gtgctggtgtacaccccgtcacgcaaggtgcacggcaagcgagtggtctgctatgatgac
cgctacatcgtgaaggtggcctacgagcaggacggcatcatcgtgtccaacgacaactac
cgcgacctgcagagcgagaacccggagtggaagtggttcatcgagcagcgtctactcatg
ttctccttcgtcaatgaccggttcatgcctcctgatgacccgctgggccgccatgggccc
accctctgcaacttcctgagcaggaagcccaggccccctgaaccttcctggcagcactgc
ccctatggcaagaaatgcacctacggcgtcaagtgcaagttctaccatccagagaggccg
caccacgcgcagctggcggtggccgacgagctccgctccaagacgcgcgcctggcctggc
gggggcgccccggctggccgcgcagcgacccggcctgcgcggccgcctgccgaactggct
gctctccaagggagcttctcacgcctgaccttcagcgacggcccggggccccatgggacg
cgccccccgggtgccccgccccggctgcgctggtccgactgggtgccccagggtggccgg
gtgcctgggccttcgccatgcccacaggctggtagcgctgctgcccccccacagccgccc
ggccttcccagcccacagagcgcgttcgcagccggggacctcccgcctcctcccgggtcg
cgcctccagccgtcgggcggacactgcgcccaggacctgcccggtgacctgtgggcccac
ccacccagctcggaccgcttccccagccgctcggcctggactgagccagcctggggccac
cgcacctgtgactgcgcggagcacgcgcgcgcccaggcgcgctccgcgctctgctcgctc
ctgcctccggagcaggtggacagtgccctggctgcgttccccgggctctccgacctcgcc
ggcctactgctcctgctgcagagatccccgagggagggcgcacagccgggaaccccctaa
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