Ochotona princeps (American pika): 101536197
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Entry
101536197 CDS
T07609
Symbol
TTC28
Name
(RefSeq) tetratricopeptide repeat protein 28
KO
K24936
tetratricopeptide repeat protein 28
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
opi03037
]
101536197 (TTC28)
Cilium and associated proteins [BR:
opi03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
101536197 (TTC28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TTC28_C
TPR_10
TPR_MalT
CFAP70_TPR_C
TPR_SusR
TPR_14
RPN7
Rapsyn_N
DUF6340
TPR_BSK1_C
TPR_16
TPR_19
TPR_NPHP3
TPR_17
TPR_6
TPR_9
ANAPC5
TPR_11
TPR_YpiA_C
Nup188_N-subdom_III
Motif
Other DBs
NCBI-GeneID:
101536197
NCBI-ProteinID:
XP_004592007
LinkDB
All DBs
Position
21:complement(15597355..16154489)
Genome browser
AA seq
2442 aa
AA seq
DB search
MEQSPSPVSESISGTTPARSRRRRESESPPAPIPLFGAKTIGRRSPDGPALSKAEFVEKV
RQSNQACHDGDFHTAIVLYNEALAVDPQNCILYSNRSAAYMKIQQYDNALNDAIKARLLN
PKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRDSLEPT
YQQLQKMKLDKSPFVVVSVVGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSALSS
AYWSLGNTEKSTGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRRQLV
LAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNMGA
VYIAMGDFENAVQCHEQHLKIAKDLGNKREEARAYSNLGSAYHYRRNFDKAMSYHNYVLE
LAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLSIAEDLKDRAAEGRASSNLGI
IHQMKGDYDTALKLHKTHLCIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQ
ISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGN
FHCSRGEYVQAAPYYEQYLRLAPDLQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQDLA
LAKDLHDKLSQAKAYCNLGLAFKALLNFSKAEECQKYLLSLAQSLNNSQAKFRALGNLGD
IFICKKDINGAIKFYEQQLGLAHHVKDRRLEASAYAALGTAYRMIQKHDKALGYHTQELE
VYQELSDLPGECRAHGHLAAVYMALGKYTMAFKCYEEQLELGQKLKDPSLEAQVYGNMGI
TKMNMNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIKYYEQ
YLSVAQSLNRMQDQAKAYRGLGNGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQAYGE
LGSLHSQLGNYEQAISCLERQLNIAREMKDRALESDAACGLGGVYQQMGEYDTALQYHQL
DLQIAEETNNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLVAKTVSYSS
LGRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEEAQHQLYR
ASALFETIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFAD
LLVERQTGQQDSDPYSPVTIDQILEMVNSQRGLVLYYSLAAGYLYSWLLAPGAGILKFHE
HYLGDSAVEHPGDFQAGSSATLPVATSSALEQHIASVREALGVEPHYSRGCASSETESEA
GDIMEQQLEEMNSKLNSVTDPTGFLRMVRRNNLFNRSCQSVTSLFSTASPTKDGTSSLPR
RQSSLAKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGSSSN
EYLYERFALIAVPAIRSLGTHAKSQLRKSSPTYPSSTSMAAVVGNPKLPSAVMDRWLWGP
MPSAEEEAYMVSELLGCQPLVGSVATKERVMSALTQAECVHFATHISWKLSALVLTPSAD
GNAAGSKSSFGHPYTIPESLRVQDDASDAESISDCPPLQELLLTAADVLDLRLPVKLVVL
GSSQESNSKVTADGVVALTRAFLAAGAQCVLVSLWPVPVAASKMFIHAFYSSLLSGLKAS
AALGEAMKAVQSSKAFAHPSHWAGFLLIGNDVKLNSPSSIIGQALTEILQHPERARDALR
VLLHLVEKSLQRIQNGQRNAMYTSQQSVENKVGGIPGWQALLTAVGFRLDPPASGLPAAV
FFPTADPGDRLQQCSSTLQSLLGLPNPALQALCKLITASETGEQLISRAVKNMVGMLHQV
LVQLQASEKEQDFAAAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGKQAS
RRAMHFALQALLALFDSTELPKRLSLDSSSSLESLASAQSVSNALPTGFQHPPFSPTGVD
SVASDAISVYSLSSIASSMSFVSKPEAGLEGGGPRARQDYDRAKNSAPQRATLPAQSRPT
GHREEEEYEGFSIISTEPLAYPESRKSRFSPDPKVPQGGLQASVSSRGSVSTPNSPVKMT
LIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEESEPKLEPQELAQKILEETQSH
LLAVERLQRSGQATKGPGPEDVRPAPSGCVFRASETSAFSRPVLSHQKSQASPVPVRPKP
PTRSSSLPKVGSGCSSPMASEASAKDSPSQHSDRPSPDQPLFKLKYPSSPYSGHISKSPR
NLSPSSGHQSPAGSAPSPALSYSSAGSARSSPADAPDLDKLKMAAIDEKVQAVHNLKMFW
QSTAQHPPGPVKLFRGTPGTLTSKRDVLSLLNLSPRHNKKEEGVDRLELQELSAPQQAPP
NGHWRPETVGPASVTPARPLRLPSGNGYKFLSPGRFFPSSKC
NT seq
7329 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtcgccttcgccggtgtccgagtcgatttcggggaccaccccggcccggagc
cgcaggcggcgggagtccgagtctccgcccgcgccgattcctctgtttggtgctaagact
attggccggagaagtcccgatggaccagcgctgagtaaagctgaatttgtggagaaagtt
cgtcagagtaaccaggcctgccatgatggagatttccacacagctattgttttgtataac
gaagcccttgctgttgaccctcagaactgcatcttatacagcaacagatctgcagcctac
atgaaaatccaacagtatgacaatgctctgaacgatgcaatcaaagcccggcttctcaac
cccaaatggccaaaggcatacttccgacagggtgttgccctccagtacctcgggcggcat
gccgatgctctggcagcctttgcctccggcctggcccaagaccccaagagtctgcagctg
ctggtggggatggtggaagctgccatgaaatctcccatgagagactccctcgagcccaca
tatcagcaacttcagaaaatgaaactggacaagagtccctttgtggtcgtgtctgtggtg
gggcaggaactcctgacagccggccaccatggggcgtctgtggtcgtcttagaagctgct
ctgaagattggcacctgcagtctcaagctgagaggttccgttttctctgccctgagcagc
gcttactggtctctcggcaacacagagaagagcactggatatatgcagcaggacttggac
gtagccaagaccttaggtgaccaaactggagaatgccgggctcacggcaatctgggctct
gcattcttctccaaaggaaattaccgcgaggctctcactaaccacaggcgtcaactggtg
ctcgccatgaaactcaaggaccgggaggcagcttcgtcagccctgagcagtctgggccat
gtgtacacagccattggagactaccccaacgccctggccagtcacaaacagtgtgtgctt
ctcgccaagcagtccaaagacgaactctctgaagcccgagagcttggcaacatgggagct
gtgtacattgccatgggtgactttgagaatgccgtgcagtgccacgagcaacatctgaag
atagcgaaggacctgggaaacaagagagaggaggcccgggcctacagcaacctggggagt
gcctatcactaccggaggaactttgacaaggccatgtcctaccacaactacgtgctggag
ctggcgcaggagttgatggagaaggctattgagatgcgggcctacgctggcctaggccac
gctgccaggtgcatgcaggatttggaaagggccaaacagtaccacgagcagcagctaagc
atcgccgaggatctcaaagaccgcgctgcagaggggcgagcgtcatccaatctaggaatc
atccaccaaatgaaaggtgattatgacactgcactgaaactccacaagacgcatctgtgc
atcgcccaggagctgagcgactatgctgcccagggccgcgcctacgggaatatgggcaat
gcttacaacgccctgggcatgtacgaccaggcggtcaagtaccaccggcaggagctgcag
atctccatggaagtgaatgaccgcgcctcgcaggcctccacccacgggaacctggctgtg
gcctaccaggccctaggtgcccatgaccgagccctgcaacactatcagaaccacctgaac
atcgcccgggagctgcgagacatccagagcgaggcccgggccctcagcaacctgggcaac
ttccactgctcccggggcgagtacgtgcaggctgctccctattacgagcagtatctccgc
cttgctcccgacctccaggacatggaaggcgaagggaaggtctgccacaaccttggctac
gcccattactgccttggcaattaccaggaagccgtgaaatactacgagcaggacctggca
ctggccaaagacctccacgacaagctgagtcaagcaaaagcctactgcaacttgggcctc
gcgtttaaggctctgctgaatttcagcaaagccgaagagtgtcagaagtacctactgtct
cttgcccagtccctgaataattcccaggcgaaatttcgagctctggggaacctgggtgat
atatttatctgtaaaaaagatataaatggtgcaataaaattctatgagcagcagctgggc
ttagctcaccacgtgaaggacaggagactggaggccagtgcctacgcagcactgggcact
gcgtaccggatgatccagaagcacgacaaggccttgggctatcacacccaggagctggag
gtctatcaggagctgagtgacttgccaggggagtgcagagctcacgggcacctggctgct
gtctacatggccctggggaaatacacgatggccttcaagtgttacgaagagcagctggag
ctgggacagaagctcaaagatccaagcctagaagcccaggtctacgggaacatgggcatc
acaaagatgaacatgaacgtgatggaggaagccatcggctacttcgagcagcagctggcc
atgctgcaacagctcagcggaaatgagtcagtgctagaccgaggccgggcctacggcaac
ctgggagattgctacgaggccctgggcgactacgaggaagctatcaagtactacgagcag
tatttatctgttgcccagagtctgaatcgtatgcaagaccaagccaaggcttaccggggc
ctaggaaatggacacagggcaatggggagcttgcagcaagccctggtgtgcttcgaaaag
aggctcgtggttgcccatgaacttggggaggccttcaataaagcccaggcctacggagag
ctgggcagtctgcacagccaattagggaattacgaacaagccatttcctgcctggagcgc
cagctgaacatcgcgcgtgagatgaaagaccgagccctggagagcgacgcggcctgtggc
ctggggggcgtctaccagcagatgggggagtatgacacagccctgcagtaccaccagctg
gatctgcagatagccgaagagaccaacaaccccacgtgccagggccgagcctacgggaac
ctgggcctgacctacgaatccctgggtaccttcgagagggccgtggtgtaccaagagcag
cacttgagtattgctgcccagatgaacgacctggtggccaagacggtatcatatagcagc
cttggaaggacccatcatgccctgcagaactattcccaggccgtcatgtacctgcaggaa
ggtttaaggttagccgagcaactaggccgaagagaagatgaggccaaaattcgccacggt
cttggcctctccctttgggcgagtggaaacctggaggaggcccaacaccagctctaccgg
gcatcggccttgtttgaaaccatccggcacgaggcacagctgagcaccgactacaagctc
tcgctgtttgacctgcagacgtcatcctaccaggccttgcagcgagtgctcgtcagccta
ggccaccacgatgaagccctggcagtggcagaaagaggacggacgagggcatttgctgat
cttctggtggaacgccaaacgggacaacaagactctgacccctactccccagtcaccatc
gatcagatcttggagatggtcaacagccagaggggcctcgtgctatactattccctggcc
gcaggctacctgtacagctggttgcttgctcccggggcaggaattctcaagtttcacgaa
cactacctgggggacagcgcagtagagcaccccggagacttccaggccggcagcagcgcc
accctgcccgtggccaccagctcagccctggagcagcacatcgccagcgtccgggaggcc
ctgggggtggaacctcactactccagaggctgtgccagcagcgagacagagagcgaagcc
ggggacatcatggagcagcagctagaggaaatgaacagcaaactgaactcggtcaccgac
cccacaggcttcttgcgcatggttcgtcgcaacaacctcttcaacaggagctgccagagt
gtgaccagcttgttcagcacggcatcgcccaccaaggatggcacctcatctctcccaagg
agacagagctcactggccaagcccccgctgcgggccctgtacgacctgctcatagcaccc
atggaagggggcctgatgcactcgagcggccccgtgggtcggcaccggcagctggtcctg
gtgctggagggggaactctacctcatccccttcgccctgctcaagggaagctcctccaac
gagtacctgtacgagcgcttcgccctcatcgccgtgcccgccatccgctcactgggcaca
catgccaagtctcagctgaggaagagctcgcccacgtaccccagctccacctccatggca
gccgtcgtcggcaaccccaagctgccgtcggcggtgatggacaggtggctgtgggggccc
atgccgtcggccgaggaggaggcctacatggtgtcggagctgctgggctgccagcctctg
gtgggcagcgtggccaccaaggagagggtcatgagcgccctgacccaggcggagtgcgtg
cacttcgccacccacatctcctggaagctgtccgccctggtccttacgcccagtgcagac
ggcaacgccgccggcagcaagagctccttcggccacccctacaccatccccgagtccctg
cgggtccaggacgacgccagcgacgccgagagcatctcggactgcccgcccctgcaggag
ctgctgctcacggccgctgacgtcctggacctgcggctgcccgtgaagctggtggtgctg
ggctcctcccaggagtccaacagcaaagtcacggccgacggggtcgtggcgctgacccgc
gccttcctggctgctggtgcgcagtgcgtgctggtgtccctgtggccggtgccagtggcc
gcatccaagatgttcatccacgccttctactcgtccctgctgagcggcctcaaggccagc
gccgccctgggcgaggccatgaaggcggtgcagagcagcaaggccttcgcgcacccctcg
cactgggcagggtttctgctcatcgggaatgacgtcaagctcaacagtccctcgtccatc
atcggccaggccctcacggagatcctgcagcatccggagcgtgcgcgggacgccctgcgt
gtgctgctgcacctggtggagaagtccctacagcgcatccagaacgggcagcgcaacgcc
atgtacacgtcccagcagagcgtggagaacaaagtgggtggcatccccggctggcaggcc
ctgctcactgctgtgggcttccgtctggaccctccagccagcgggctgccggcggccgtc
ttcttccccaccgctgacccgggagaccggctccagcagtgtagcagcaccctgcagtcc
ctgctgggtctgcccaaccctgccctccaagccctgtgcaagctcatcacggcctcggag
acaggcgagcagctcatcagccgggctgttaaaaatatggtgggaatgctccatcaggtg
ctggtgcagctccaggccagcgagaaggagcaggactttgccgcagcgcccatccaggtc
tccatcagcgtgcagctgtggcggctccctggctgccacgagttcctggcggctctaggc
tttgatctctgcgaggtcggtcaggaggaggtcatcctgaagaccgggaagcaggccagc
cggcgcgccatgcacttcgcactgcaggccctgctcgcgctctttgattccacagagctg
cccaagcgcctcagcctggacagctcctcctcgctggagtccctggcctctgcgcagtcg
gtctccaacgccctgcccacgggcttccagcacccacccttctcccccacgggcgtggac
agcgtggcctcagatgccatctccgtgtacagcctcagctccatcgcctcctccatgagc
ttcgtctccaagcccgaggcggggctggaaggtgggggccccagggcgcggcaagactat
gaccgggccaagaatagcgccccgcagcgggccactctgcccgcccagagccgccccacg
ggccacagggaagaagaagaatacgagggcttctccatcatcagcaccgagcccctggcc
taccccgagagcaggaagagccgcttctcaccggaccccaaggtcccacagggagggctc
caggcctccgtgagctcccgggggagcgtgagcacccccaactccccagtaaagatgaca
ctcattcccagccccaactcccccttccagaaggtggggaagctggcaagttcggacaca
ggggagtcggaccagtccagcactgagacagacagcaccgtgaagtcccaggaggagagc
gagcccaagcttgagccacaggagctggcccagaagatcctggaggagacgcagagccac
ctcctggccgtggagcggctgcagcgcagtggccaggccaccaaaggccctggccctgag
gacgtgcgcccggcgcccagcggctgcgtattcagggcatccgagacgagcgccttcagc
aggcccgtcctgtcccaccagaagagccaggcctcgccagtgcccgtgagaccaaagccc
cccacccggagctcgtccctccccaaggtgggctccggctgcagcagccccatggcctca
gaggcgtccgccaaggacagcccgagccagcacagtgaccgcccctcgcctgaccagcca
ctcttcaagctcaagtaccccagttcgccctacagcggacacatctccaagtcaccgagg
aacctgtcccccagctcgggccaccagtcgcccgcgggcagcgccccatccccagcactc
tcgtactcctcagctggctccgcacgctcaagtccagcagatgcgcccgacctggacaag
ctgaagatggccgccatcgatgagaaggtgcaggctgtccacaacctcaagatgttctgg
cagagcacggcccagcacccgccgggccccgtgaagctcttccggggcacccccggcacc
ctgacgtccaagagggacgtcctcagcctgctgaacctgtccccccgacacaacaagaag
gaggagggggtggacaggctggagctgcaggagctgtcggcgccacagcaggcccccccc
aacggacactggcgccctgagactgtgggccctgccagcgtcacacctgcgcgccccctg
agactcccctccggaaacggctacaagttcctgtccccgggcaggtttttcccctcctcc
aagtgctag
DBGET
integrated database retrieval system
